Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 CDH12P1-201ENST00000518435 295 ntBASIC2.47□□□□□ -2.01
AP1S3Q96PC3 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC2.47□□□□□ -2.01
AP1S3Q96PC3 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC2.47□□□□□ -2.01
AP1S3Q96PC3 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC2.47□□□□□ -2.01
AP1S3Q96PC3 MTCO3P13-201ENST00000577757 781 ntBASIC2.47□□□□□ -2.01
AP1S3Q96PC3 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC2.47□□□□□ -2.01
AP1S3Q96PC3 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC2.47□□□□□ -2.01
AP1S3Q96PC3 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC2.47□□□□□ -2.01
AP1S3Q96PC3 MIR6875-201ENST00000617506 72 ntBASIC2.47□□□□□ -2.01
AP1S3Q96PC3 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC2.47□□□□□ -2.01
AP1S3Q96PC3 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC2.47□□□□□ -2.01
AP1S3Q96PC3 AC015726.3-201ENST00000624501 418 ntBASIC2.47□□□□□ -2.01
AP1S3Q96PC3 MIR6830-201ENST00000636015 70 ntBASIC2.47□□□□□ -2.01
AP1S3Q96PC3 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
AP1S3Q96PC3 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
AP1S3Q96PC3 MTCO1P24-201ENST00000515438 1558 ntBASIC2.47□□□□□ -2.01
AP1S3Q96PC3 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
AP1S3Q96PC3 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC2.47□□□□□ -2.01
AP1S3Q96PC3 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC2.47□□□□□ -2.01
AP1S3Q96PC3 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC2.47□□□□□ -2.01
AP1S3Q96PC3 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
AP1S3Q96PC3 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
AP1S3Q96PC3 MIR372-201ENST00000362225 67 ntBASIC2.46□□□□□ -2.02
AP1S3Q96PC3 SNORD9-201ENST00000362566 104 ntBASIC2.46□□□□□ -2.02
AP1S3Q96PC3 RNA5SP391-201ENST00000363456 119 ntBASIC2.46□□□□□ -2.02
AP1S3Q96PC3 RNU6-666P-201ENST00000363499 107 ntBASIC2.46□□□□□ -2.02
AP1S3Q96PC3 RNU6-1251P-201ENST00000364502 107 ntBASIC2.46□□□□□ -2.02
AP1S3Q96PC3 RNU6-335P-201ENST00000364563 113 ntBASIC2.46□□□□□ -2.02
AP1S3Q96PC3 AL138880.1-201ENST00000405824 642 ntBASIC2.46□□□□□ -2.02
AP1S3Q96PC3 RNU2-21P-201ENST00000410368 188 ntBASIC2.46□□□□□ -2.02
AP1S3Q96PC3 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC2.46□□□□□ -2.02
AP1S3Q96PC3 CST9LP2-201ENST00000437612 320 ntBASIC2.46□□□□□ -2.02
AP1S3Q96PC3 RRM2P4-201ENST00000441721 562 ntBASIC2.46□□□□□ -2.02
AP1S3Q96PC3 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC2.46□□□□□ -2.02
AP1S3Q96PC3 OR6K1P-201ENST00000456766 971 ntBASIC2.46□□□□□ -2.02
AP1S3Q96PC3 RN7SL499P-201ENST00000481141 276 ntBASIC2.46□□□□□ -2.02
AP1S3Q96PC3 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC2.46□□□□□ -2.02
AP1S3Q96PC3 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC2.46□□□□□ -2.02
AP1S3Q96PC3 RNU6-826P-201ENST00000516827 104 ntBASIC2.46□□□□□ -2.02
AP1S3Q96PC3 SNORD59.2-201ENST00000516873 68 ntBASIC2.46□□□□□ -2.02
AP1S3Q96PC3 SEC11B-201ENST00000518383 499 ntBASIC2.46□□□□□ -2.02
AP1S3Q96PC3 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC2.46□□□□□ -2.02
AP1S3Q96PC3 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
AP1S3Q96PC3 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC2.46□□□□□ -2.02
AP1S3Q96PC3 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC2.46□□□□□ -2.02
AP1S3Q96PC3 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC2.46□□□□□ -2.02
AP1S3Q96PC3 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC2.46□□□□□ -2.02
AP1S3Q96PC3 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC2.46□□□□□ -2.02
AP1S3Q96PC3 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC2.46□□□□□ -2.02
AP1S3Q96PC3 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC2.46□□□□□ -2.02
AP1S3Q96PC3 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC2.46□□□□□ -2.02
AP1S3Q96PC3 MTND4LP24-201ENST00000572277 291 ntBASIC2.46□□□□□ -2.02
AP1S3Q96PC3 AC015917.1-201ENST00000579654 510 ntBASIC2.46□□□□□ -2.02
AP1S3Q96PC3 MIR7973-1-201ENST00000614683 76 ntBASIC2.46□□□□□ -2.02
AP1S3Q96PC3 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC2.46□□□□□ -2.02
AP1S3Q96PC3 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
AP1S3Q96PC3 AC093831.2-201ENST00000624393 3427 ntBASIC2.46□□□□□ -2.02
AP1S3Q96PC3 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
AP1S3Q96PC3 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
AP1S3Q96PC3 AC011978.2-201ENST00000569835 2054 ntBASIC2.45□□□□□ -2.02
AP1S3Q96PC3 Y_RNA.62-201ENST00000362840 99 ntBASIC2.45□□□□□ -2.02
AP1S3Q96PC3 U3.6-201ENST00000363622 211 ntBASIC2.45□□□□□ -2.02
AP1S3Q96PC3 MIR585-201ENST00000384887 94 ntBASIC2.45□□□□□ -2.02
AP1S3Q96PC3 RNU1-101P-201ENST00000391171 127 ntBASIC2.45□□□□□ -2.02
AP1S3Q96PC3 AL049693.1-201ENST00000402760 611 ntBASIC2.45□□□□□ -2.02
AP1S3Q96PC3 PPIAP31-201ENST00000405422 495 ntBASIC2.45□□□□□ -2.02
AP1S3Q96PC3 AL355379.1-201ENST00000405542 640 ntBASIC2.45□□□□□ -2.02
AP1S3Q96PC3 RNA5SP44-201ENST00000410446 133 ntBASIC2.45□□□□□ -2.02
AP1S3Q96PC3 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC2.45□□□□□ -2.02
AP1S3Q96PC3 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC2.45□□□□□ -2.02
AP1S3Q96PC3 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC2.45□□□□□ -2.02
AP1S3Q96PC3 OR4F13P-201ENST00000428478 931 ntBASIC2.45□□□□□ -2.02
AP1S3Q96PC3 AL031663.1-201ENST00000437445 219 ntBASIC2.45□□□□□ -2.02
AP1S3Q96PC3 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC2.45□□□□□ -2.02
AP1S3Q96PC3 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC2.45□□□□□ -2.02
AP1S3Q96PC3 AC140076.1-201ENST00000449897 361 ntBASIC2.45□□□□□ -2.02
AP1S3Q96PC3 RPL36AP33-201ENST00000450395 310 ntBASIC2.45□□□□□ -2.02
AP1S3Q96PC3 FPGT-203ENST00000467578 601 ntTSL 2 BASIC2.45□□□□□ -2.02
AP1S3Q96PC3 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC2.45□□□□□ -2.02
AP1S3Q96PC3 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC2.45□□□□□ -2.02
AP1S3Q96PC3 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC2.45□□□□□ -2.02
AP1S3Q96PC3 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC2.45□□□□□ -2.02
AP1S3Q96PC3 AP001960.1-201ENST00000506494 658 ntBASIC2.45□□□□□ -2.02
AP1S3Q96PC3 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC2.45□□□□□ -2.02
AP1S3Q96PC3 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.45□□□□□ -2.02
AP1S3Q96PC3 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC2.45□□□□□ -2.02
AP1S3Q96PC3 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC2.45□□□□□ -2.02
AP1S3Q96PC3 RNU6-319P-201ENST00000516025 108 ntBASIC2.45□□□□□ -2.02
AP1S3Q96PC3 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC2.45□□□□□ -2.02
AP1S3Q96PC3 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC2.45□□□□□ -2.02
AP1S3Q96PC3 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC2.45□□□□□ -2.02
AP1S3Q96PC3 AL392112.1-201ENST00000605115 829 ntBASIC2.45□□□□□ -2.02
AP1S3Q96PC3 SNORA35B-201ENST00000607417 129 ntBASIC2.45□□□□□ -2.02
AP1S3Q96PC3 AC131902.3-201ENST00000611767 581 ntBASIC2.45□□□□□ -2.02
AP1S3Q96PC3 AC007342.8-201ENST00000623278 678 ntBASIC2.45□□□□□ -2.02
AP1S3Q96PC3 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC2.45□□□□□ -2.02
AP1S3Q96PC3 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC2.45□□□□□ -2.02
AP1S3Q96PC3 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
AP1S3Q96PC3 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC2.45□□□□□ -2.02
AP1S3Q96PC3 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC2.44□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms