Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 RPL29P29-201ENST00000448725 423 ntBASIC4.82□□□□□ -1.64
TOPBP1Q92547 ANXA2P1-201ENST00000505539 926 ntBASIC4.82□□□□□ -1.64
TOPBP1Q92547 AC009237.17-201ENST00000618111 748 ntBASIC4.82□□□□□ -1.64
TOPBP1Q92547 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
TOPBP1Q92547 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC4.82□□□□□ -1.64
TOPBP1Q92547 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
TOPBP1Q92547 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.82□□□□□ -1.64
TOPBP1Q92547 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC4.82□□□□□ -1.64
TOPBP1Q92547 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.82□□□□□ -1.64
TOPBP1Q92547 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC4.82□□□□□ -1.64
TOPBP1Q92547 U3.42-201ENST00000408746 214 ntBASIC4.82□□□□□ -1.64
TOPBP1Q92547 AC105402.1-201ENST00000413336 545 ntBASIC4.82□□□□□ -1.64
TOPBP1Q92547 AC009963.1-201ENST00000417265 157 ntBASIC4.82□□□□□ -1.64
TOPBP1Q92547 GLRXP1-201ENST00000423261 334 ntBASIC4.82□□□□□ -1.64
TOPBP1Q92547 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC4.82□□□□□ -1.64
TOPBP1Q92547 AC073587.1-201ENST00000447093 876 ntBASIC4.82□□□□□ -1.64
TOPBP1Q92547 NECAP1P2-201ENST00000455668 727 ntBASIC4.82□□□□□ -1.64
TOPBP1Q92547 AP000942.1-201ENST00000463969 747 ntBASIC4.82□□□□□ -1.64
TOPBP1Q92547 AC090543.2-201ENST00000483963 348 ntBASIC4.82□□□□□ -1.64
TOPBP1Q92547 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC4.82□□□□□ -1.64
TOPBP1Q92547 AC027176.1-201ENST00000560204 514 ntBASIC4.82□□□□□ -1.64
TOPBP1Q92547 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.81□□□□□ -1.64
TOPBP1Q92547 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
TOPBP1Q92547 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
TOPBP1Q92547 MIR504-201ENST00000385065 83 ntBASIC4.81□□□□□ -1.64
TOPBP1Q92547 HNRNPDLP1-201ENST00000412834 550 ntBASIC4.81□□□□□ -1.64
TOPBP1Q92547 SMC4P1-201ENST00000414479 527 ntBASIC4.81□□□□□ -1.64
TOPBP1Q92547 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
TOPBP1Q92547 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC4.81□□□□□ -1.64
TOPBP1Q92547 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC4.81□□□□□ -1.64
TOPBP1Q92547 AC007954.1-201ENST00000554198 494 ntBASIC4.81□□□□□ -1.64
TOPBP1Q92547 TGIF1P1-201ENST00000558095 802 ntBASIC4.81□□□□□ -1.64
TOPBP1Q92547 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.81□□□□□ -1.64
TOPBP1Q92547 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC4.8□□□□□ -1.64
TOPBP1Q92547 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
TOPBP1Q92547 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
TOPBP1Q92547 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
TOPBP1Q92547 RNA5SP68-201ENST00000363885 119 ntBASIC4.8□□□□□ -1.64
TOPBP1Q92547 HMGB1P19-201ENST00000517578 577 ntBASIC4.8□□□□□ -1.64
TOPBP1Q92547 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC4.8□□□□□ -1.64
TOPBP1Q92547 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.8□□□□□ -1.64
TOPBP1Q92547 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
TOPBP1Q92547 SEPT7P2-202ENST00000398921 823 ntBASIC4.79□□□□□ -1.64
TOPBP1Q92547 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC4.79□□□□□ -1.64
TOPBP1Q92547 HMGB1P16-201ENST00000447155 540 ntBASIC4.79□□□□□ -1.64
TOPBP1Q92547 snoU13.15-201ENST00000459407 104 ntBASIC4.79□□□□□ -1.64
TOPBP1Q92547 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC4.79□□□□□ -1.64
TOPBP1Q92547 AC006445.2-201ENST00000510061 472 ntBASIC4.79□□□□□ -1.64
TOPBP1Q92547 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC4.79□□□□□ -1.64
TOPBP1Q92547 SERPINE4P-201ENST00000554978 281 ntBASIC4.79□□□□□ -1.64
TOPBP1Q92547 HMGB1P50-201ENST00000605814 607 ntBASIC4.79□□□□□ -1.64
TOPBP1Q92547 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC4.79□□□□□ -1.64
TOPBP1Q92547 AC063923.1-201ENST00000478982 1619 ntBASIC4.79□□□□□ -1.64
TOPBP1Q92547 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
TOPBP1Q92547 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
TOPBP1Q92547 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC4.79□□□□□ -1.64
TOPBP1Q92547 AC107027.3-201ENST00000565095 3473 ntBASIC4.79□□□□□ -1.64
TOPBP1Q92547 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.79□□□□□ -1.64
TOPBP1Q92547 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
TOPBP1Q92547 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
TOPBP1Q92547 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC4.78□□□□□ -1.64
TOPBP1Q92547 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.78□□□□□ -1.64
TOPBP1Q92547 AL162389.1-201ENST00000449233 177 ntBASIC4.78□□□□□ -1.64
TOPBP1Q92547 ARL2BPP6-201ENST00000512757 439 ntBASIC4.78□□□□□ -1.64
TOPBP1Q92547 RNU4ATAC3P-201ENST00000516699 126 ntBASIC4.78□□□□□ -1.64
TOPBP1Q92547 AC098826.3-201ENST00000603823 466 ntBASIC4.78□□□□□ -1.64
TOPBP1Q92547 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
TOPBP1Q92547 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
TOPBP1Q92547 AL121834.1-202ENST00000404494 277 ntBASIC4.77□□□□□ -1.65
TOPBP1Q92547 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC4.77□□□□□ -1.65
TOPBP1Q92547 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
TOPBP1Q92547 MIR4425-201ENST00000580572 84 ntBASIC4.77□□□□□ -1.65
TOPBP1Q92547 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC4.77□□□□□ -1.65
TOPBP1Q92547 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC4.77□□□□□ -1.65
TOPBP1Q92547 AL359715.5-201ENST00000623431 443 ntBASIC4.77□□□□□ -1.65
TOPBP1Q92547 GABRG2-229ENST00000641017 3628 ntBASIC4.77□□□□□ -1.65
TOPBP1Q92547 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
TOPBP1Q92547 HSPA8P1-201ENST00000425843 1833 ntBASIC4.77□□□□□ -1.65
TOPBP1Q92547 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
TOPBP1Q92547 KPNA2P2-201ENST00000419546 1489 ntBASIC4.77□□□□□ -1.65
TOPBP1Q92547 CBX1P4-201ENST00000439415 457 ntBASIC4.77□□□□□ -1.65
TOPBP1Q92547 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC4.77□□□□□ -1.65
TOPBP1Q92547 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC4.77□□□□□ -1.65
TOPBP1Q92547 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC4.77□□□□□ -1.65
TOPBP1Q92547 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC4.77□□□□□ -1.65
TOPBP1Q92547 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
TOPBP1Q92547 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.77□□□□□ -1.65
TOPBP1Q92547 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC4.76□□□□□ -1.65
TOPBP1Q92547 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.76□□□□□ -1.65
TOPBP1Q92547 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
TOPBP1Q92547 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.76□□□□□ -1.65
TOPBP1Q92547 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
TOPBP1Q92547 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
TOPBP1Q92547 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
TOPBP1Q92547 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
TOPBP1Q92547 ZNF603P-201ENST00000405613 487 ntBASIC4.76□□□□□ -1.65
TOPBP1Q92547 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC4.76□□□□□ -1.65
TOPBP1Q92547 RNA5SP148-201ENST00000516527 94 ntBASIC4.76□□□□□ -1.65
TOPBP1Q92547 AP003122.3-201ENST00000526316 255 ntBASIC4.76□□□□□ -1.65
TOPBP1Q92547 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 153 ms