Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 AC103792.1-201ENST00000603591 919 ntBASIC5.15□□□□□ -1.59
TRIM48Q8IWZ4 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5.15□□□□□ -1.59
TRIM48Q8IWZ4 AC009597.2-201ENST00000604659 592 ntBASIC5.15□□□□□ -1.59
TRIM48Q8IWZ4 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC5.15□□□□□ -1.59
TRIM48Q8IWZ4 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.15□□□□□ -1.59
TRIM48Q8IWZ4 AC128687.2-201ENST00000609657 566 ntBASIC5.15□□□□□ -1.59
TRIM48Q8IWZ4 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC5.15□□□□□ -1.59
TRIM48Q8IWZ4 AL133173.2-201ENST00000614270 90 ntBASIC5.15□□□□□ -1.59
TRIM48Q8IWZ4 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC5.15□□□□□ -1.59
TRIM48Q8IWZ4 AC090527.3-201ENST00000619041 548 ntBASIC5.15□□□□□ -1.59
TRIM48Q8IWZ4 AC010338.1-201ENST00000621823 717 ntBASIC5.15□□□□□ -1.59
TRIM48Q8IWZ4 AC099654.6-201ENST00000636487 512 ntBASIC5.15□□□□□ -1.59
TRIM48Q8IWZ4 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC5.15□□□□□ -1.59
TRIM48Q8IWZ4 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
TRIM48Q8IWZ4 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.15□□□□□ -1.59
TRIM48Q8IWZ4 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
TRIM48Q8IWZ4 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
TRIM48Q8IWZ4 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
TRIM48Q8IWZ4 AC092747.4-201ENST00000620519 1861 ntBASIC5.15□□□□□ -1.59
TRIM48Q8IWZ4 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
TRIM48Q8IWZ4 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
TRIM48Q8IWZ4 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.15□□□□□ -1.59
TRIM48Q8IWZ4 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
TRIM48Q8IWZ4 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
TRIM48Q8IWZ4 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.14□□□□□ -1.59
TRIM48Q8IWZ4 AC024560.2-201ENST00000507981 1497 ntBASIC5.14□□□□□ -1.59
TRIM48Q8IWZ4 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
TRIM48Q8IWZ4 AC100757.1-201ENST00000616872 1835 ntBASIC5.14□□□□□ -1.59
TRIM48Q8IWZ4 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
TRIM48Q8IWZ4 AC006484.1-201ENST00000435086 1884 ntBASIC5.14□□□□□ -1.59
TRIM48Q8IWZ4 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.14□□□□□ -1.59
TRIM48Q8IWZ4 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
TRIM48Q8IWZ4 RN7SKP153-201ENST00000365026 316 ntBASIC5.14□□□□□ -1.59
TRIM48Q8IWZ4 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
TRIM48Q8IWZ4 AL031679.1-201ENST00000400616 525 ntBASIC5.14□□□□□ -1.59
TRIM48Q8IWZ4 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
TRIM48Q8IWZ4 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC5.14□□□□□ -1.59
TRIM48Q8IWZ4 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC5.14□□□□□ -1.59
TRIM48Q8IWZ4 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC5.14□□□□□ -1.59
TRIM48Q8IWZ4 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC5.14□□□□□ -1.59
TRIM48Q8IWZ4 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC5.14□□□□□ -1.59
TRIM48Q8IWZ4 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC5.14□□□□□ -1.59
TRIM48Q8IWZ4 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC5.14□□□□□ -1.59
TRIM48Q8IWZ4 AC006511.1-201ENST00000470614 315 ntBASIC5.14□□□□□ -1.59
TRIM48Q8IWZ4 RPL35P6-201ENST00000490024 372 ntBASIC5.14□□□□□ -1.59
TRIM48Q8IWZ4 AC114967.1-201ENST00000504890 259 ntBASIC5.14□□□□□ -1.59
TRIM48Q8IWZ4 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC5.14□□□□□ -1.59
TRIM48Q8IWZ4 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC5.14□□□□□ -1.59
TRIM48Q8IWZ4 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC5.14□□□□□ -1.59
TRIM48Q8IWZ4 LRRC34P2-201ENST00000514850 553 ntBASIC5.14□□□□□ -1.59
TRIM48Q8IWZ4 RNU6-1281P-201ENST00000516223 105 ntBASIC5.14□□□□□ -1.59
TRIM48Q8IWZ4 RN7SKP66-201ENST00000516681 231 ntBASIC5.14□□□□□ -1.59
TRIM48Q8IWZ4 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC5.14□□□□□ -1.59
TRIM48Q8IWZ4 MAL2-208ENST00000523307 556 ntTSL 4 BASIC5.14□□□□□ -1.59
TRIM48Q8IWZ4 AF235103.2-201ENST00000525753 346 ntBASIC5.14□□□□□ -1.59
TRIM48Q8IWZ4 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
TRIM48Q8IWZ4 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC5.14□□□□□ -1.59
TRIM48Q8IWZ4 AC034268.2-201ENST00000571784 482 ntBASIC5.14□□□□□ -1.59
TRIM48Q8IWZ4 MIR4443-201ENST00000585052 53 ntBASIC5.14□□□□□ -1.59
TRIM48Q8IWZ4 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC5.14□□□□□ -1.59
TRIM48Q8IWZ4 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC5.14□□□□□ -1.59
TRIM48Q8IWZ4 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
TRIM48Q8IWZ4 RNU6-87P-201ENST00000607561 108 ntBASIC5.14□□□□□ -1.59
TRIM48Q8IWZ4 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
TRIM48Q8IWZ4 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.14□□□□□ -1.59
TRIM48Q8IWZ4 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.14□□□□□ -1.59
TRIM48Q8IWZ4 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
TRIM48Q8IWZ4 AC138915.3-201ENST00000562908 1389 ntBASIC5.14□□□□□ -1.59
TRIM48Q8IWZ4 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.14□□□□□ -1.59
TRIM48Q8IWZ4 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.14□□□□□ -1.59
TRIM48Q8IWZ4 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
TRIM48Q8IWZ4 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
TRIM48Q8IWZ4 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.13□□□□□ -1.59
TRIM48Q8IWZ4 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.13□□□□□ -1.59
TRIM48Q8IWZ4 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.13□□□□□ -1.59
TRIM48Q8IWZ4 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
TRIM48Q8IWZ4 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
TRIM48Q8IWZ4 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
TRIM48Q8IWZ4 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
TRIM48Q8IWZ4 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
TRIM48Q8IWZ4 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.13□□□□□ -1.59
TRIM48Q8IWZ4 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
TRIM48Q8IWZ4 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
TRIM48Q8IWZ4 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.13□□□□□ -1.59
TRIM48Q8IWZ4 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.13□□□□□ -1.59
TRIM48Q8IWZ4 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
TRIM48Q8IWZ4 AC025574.1-201ENST00000554784 1653 ntBASIC5.13□□□□□ -1.59
TRIM48Q8IWZ4 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.13□□□□□ -1.59
TRIM48Q8IWZ4 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.13□□□□□ -1.59
TRIM48Q8IWZ4 U8.4-201ENST00000363626 134 ntBASIC5.13□□□□□ -1.59
TRIM48Q8IWZ4 Y_RNA.381-201ENST00000365666 102 ntBASIC5.13□□□□□ -1.59
TRIM48Q8IWZ4 MIR765-201ENST00000390226 114 ntBASIC5.13□□□□□ -1.59
TRIM48Q8IWZ4 RPL7P25-201ENST00000404151 721 ntBASIC5.13□□□□□ -1.59
TRIM48Q8IWZ4 U3.36-201ENST00000408418 213 ntBASIC5.13□□□□□ -1.59
TRIM48Q8IWZ4 AC016769.2-201ENST00000414815 475 ntBASIC5.13□□□□□ -1.59
TRIM48Q8IWZ4 NUP35P2-201ENST00000416748 943 ntBASIC5.13□□□□□ -1.59
TRIM48Q8IWZ4 RPL7P57-201ENST00000423238 740 ntBASIC5.13□□□□□ -1.59
TRIM48Q8IWZ4 AC133104.1-201ENST00000429100 218 ntBASIC5.13□□□□□ -1.59
TRIM48Q8IWZ4 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC5.13□□□□□ -1.59
TRIM48Q8IWZ4 RPL12P18-201ENST00000437175 325 ntBASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms