Protein–RNA interactions for Protein: Q8IUI8

CRLF3, Cytokine receptor-like factor 3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3Q8IUI8 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
CRLF3Q8IUI8 RNU2-65P-201ENST00000410162 185 ntBASIC3.38□□□□□ -1.87
CRLF3Q8IUI8 CRYBB2P1-203ENST00000415709 538 ntBASIC3.38□□□□□ -1.87
CRLF3Q8IUI8 AC234782.4-201ENST00000417646 1048 ntBASIC3.38□□□□□ -1.87
CRLF3Q8IUI8 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.38□□□□□ -1.87
CRLF3Q8IUI8 AL160175.1-201ENST00000428124 247 ntBASIC3.38□□□□□ -1.87
CRLF3Q8IUI8 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.38□□□□□ -1.87
CRLF3Q8IUI8 CYCSP43-201ENST00000438233 310 ntBASIC3.38□□□□□ -1.87
CRLF3Q8IUI8 HMGB3P11-201ENST00000440127 604 ntBASIC3.38□□□□□ -1.87
CRLF3Q8IUI8 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC3.38□□□□□ -1.87
CRLF3Q8IUI8 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.38□□□□□ -1.87
CRLF3Q8IUI8 AC073387.1-201ENST00000453261 709 ntBASIC3.38□□□□□ -1.87
CRLF3Q8IUI8 SNORD105B-201ENST00000458770 79 ntBASIC3.38□□□□□ -1.87
CRLF3Q8IUI8 snoU13.22-201ENST00000459428 104 ntBASIC3.38□□□□□ -1.87
CRLF3Q8IUI8 AC096992.1-201ENST00000459808 709 ntBASIC3.38□□□□□ -1.87
CRLF3Q8IUI8 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC3.38□□□□□ -1.87
CRLF3Q8IUI8 RPL7P49-201ENST00000471402 708 ntBASIC3.38□□□□□ -1.87
CRLF3Q8IUI8 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CRLF3Q8IUI8 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC3.38□□□□□ -1.87
CRLF3Q8IUI8 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.38□□□□□ -1.87
CRLF3Q8IUI8 AL049870.4-201ENST00000555741 486 ntBASIC3.38□□□□□ -1.87
CRLF3Q8IUI8 CENPUP2-201ENST00000555897 1186 ntBASIC3.38□□□□□ -1.87
CRLF3Q8IUI8 AC037471.2-201ENST00000564941 598 ntBASIC3.38□□□□□ -1.87
CRLF3Q8IUI8 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.38□□□□□ -1.87
CRLF3Q8IUI8 MIR5047-201ENST00000579212 100 ntBASIC3.38□□□□□ -1.87
CRLF3Q8IUI8 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.38□□□□□ -1.87
CRLF3Q8IUI8 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC3.38□□□□□ -1.87
CRLF3Q8IUI8 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC3.38□□□□□ -1.87
CRLF3Q8IUI8 AC084757.4-201ENST00000616350 526 ntBASIC3.38□□□□□ -1.87
CRLF3Q8IUI8 AC048347.1-201ENST00000624621 427 ntBASIC3.38□□□□□ -1.87
CRLF3Q8IUI8 AC073476.4-201ENST00000628409 72 ntBASIC3.38□□□□□ -1.87
CRLF3Q8IUI8 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC3.38□□□□□ -1.87
CRLF3Q8IUI8 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CRLF3Q8IUI8 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CRLF3Q8IUI8 AL592494.2-201ENST00000425455 1548 ntBASIC3.38□□□□□ -1.87
CRLF3Q8IUI8 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CRLF3Q8IUI8 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CRLF3Q8IUI8 USP8P1-201ENST00000494673 3183 ntBASIC3.37□□□□□ -1.87
CRLF3Q8IUI8 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
CRLF3Q8IUI8 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CRLF3Q8IUI8 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CRLF3Q8IUI8 RPL7P26-201ENST00000333817 754 ntBASIC3.37□□□□□ -1.87
CRLF3Q8IUI8 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CRLF3Q8IUI8 MIR208A-201ENST00000362287 71 ntBASIC3.37□□□□□ -1.87
CRLF3Q8IUI8 SNORD46.1-201ENST00000364139 104 ntBASIC3.37□□□□□ -1.87
CRLF3Q8IUI8 RNA5SP189-201ENST00000364920 115 ntBASIC3.37□□□□□ -1.87
CRLF3Q8IUI8 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.37□□□□□ -1.87
CRLF3Q8IUI8 Z99755.1-201ENST00000414048 380 ntBASIC3.37□□□□□ -1.87
CRLF3Q8IUI8 HMGB3P23-201ENST00000414981 585 ntBASIC3.37□□□□□ -1.87
CRLF3Q8IUI8 AC017079.2-201ENST00000416102 485 ntBASIC3.37□□□□□ -1.87
CRLF3Q8IUI8 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.37□□□□□ -1.87
CRLF3Q8IUI8 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.37□□□□□ -1.87
CRLF3Q8IUI8 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.37□□□□□ -1.87
CRLF3Q8IUI8 AL606490.7-201ENST00000433136 191 ntBASIC3.37□□□□□ -1.87
CRLF3Q8IUI8 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC3.37□□□□□ -1.87
CRLF3Q8IUI8 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.37□□□□□ -1.87
CRLF3Q8IUI8 RPL29P29-201ENST00000448725 423 ntBASIC3.37□□□□□ -1.87
CRLF3Q8IUI8 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.37□□□□□ -1.87
CRLF3Q8IUI8 AC093331.1-201ENST00000521474 169 ntBASIC3.37□□□□□ -1.87
CRLF3Q8IUI8 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC3.37□□□□□ -1.87
CRLF3Q8IUI8 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.37□□□□□ -1.87
CRLF3Q8IUI8 OR5B10P-201ENST00000532869 642 ntBASIC3.37□□□□□ -1.87
CRLF3Q8IUI8 OR8L1P-201ENST00000534005 955 ntBASIC3.37□□□□□ -1.87
CRLF3Q8IUI8 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.37□□□□□ -1.87
CRLF3Q8IUI8 AL121594.4-201ENST00000556211 1196 ntBASIC3.37□□□□□ -1.87
CRLF3Q8IUI8 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.37□□□□□ -1.87
CRLF3Q8IUI8 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC3.37□□□□□ -1.87
CRLF3Q8IUI8 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC3.37□□□□□ -1.87
CRLF3Q8IUI8 AC020914.6-201ENST00000594327 272 ntBASIC3.37□□□□□ -1.87
CRLF3Q8IUI8 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.37□□□□□ -1.87
CRLF3Q8IUI8 AC092354.2-201ENST00000607786 514 ntBASIC3.37□□□□□ -1.87
CRLF3Q8IUI8 AC015967.1-201ENST00000619893 476 ntBASIC3.37□□□□□ -1.87
CRLF3Q8IUI8 U4.6-201ENST00000621618 127 ntBASIC3.37□□□□□ -1.87
CRLF3Q8IUI8 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CRLF3Q8IUI8 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CRLF3Q8IUI8 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CRLF3Q8IUI8 MTND4P31-201ENST00000425607 1343 ntBASIC3.37□□□□□ -1.87
CRLF3Q8IUI8 ZNF542P-204ENST00000482727 1305 ntBASIC3.37□□□□□ -1.87
CRLF3Q8IUI8 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CRLF3Q8IUI8 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CRLF3Q8IUI8 AC090337.1-201ENST00000579651 2074 ntBASIC3.36□□□□□ -1.87
CRLF3Q8IUI8 MIR148B-201ENST00000362252 99 ntBASIC3.36□□□□□ -1.87
CRLF3Q8IUI8 SNORA70.4-201ENST00000365509 134 ntBASIC3.36□□□□□ -1.87
CRLF3Q8IUI8 AC007390.1-201ENST00000415722 356 ntBASIC3.36□□□□□ -1.87
CRLF3Q8IUI8 AC245052.5-201ENST00000416320 649 ntBASIC3.36□□□□□ -1.87
CRLF3Q8IUI8 AIMP1P1-201ENST00000418670 937 ntBASIC3.36□□□□□ -1.87
CRLF3Q8IUI8 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC3.36□□□□□ -1.87
CRLF3Q8IUI8 AC241520.1-201ENST00000422654 1099 ntBASIC3.36□□□□□ -1.87
CRLF3Q8IUI8 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC3.36□□□□□ -1.87
CRLF3Q8IUI8 USP9YP31-201ENST00000431405 881 ntBASIC3.36□□□□□ -1.87
CRLF3Q8IUI8 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.36□□□□□ -1.87
CRLF3Q8IUI8 Z85994.2-201ENST00000434327 452 ntBASIC3.36□□□□□ -1.87
CRLF3Q8IUI8 AC073063.1-201ENST00000434352 607 ntBASIC3.36□□□□□ -1.87
CRLF3Q8IUI8 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.36□□□□□ -1.87
CRLF3Q8IUI8 RPL34P26-201ENST00000445636 354 ntBASIC3.36□□□□□ -1.87
CRLF3Q8IUI8 RPL21P23-201ENST00000446654 460 ntBASIC3.36□□□□□ -1.87
CRLF3Q8IUI8 RN7SL293P-201ENST00000481765 281 ntBASIC3.36□□□□□ -1.87
CRLF3Q8IUI8 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CRLF3Q8IUI8 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC3.36□□□□□ -1.87
CRLF3Q8IUI8 PCNAP1-201ENST00000505363 709 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms