Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
RSPO4Q2I0M5 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC5.7□□□□□ -1.5
RSPO4Q2I0M5 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC5.7□□□□□ -1.5
RSPO4Q2I0M5 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.7□□□□□ -1.5
RSPO4Q2I0M5 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC5.7□□□□□ -1.5
RSPO4Q2I0M5 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC5.7□□□□□ -1.5
RSPO4Q2I0M5 CSMD2-206ENST00000373388 13118 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
RSPO4Q2I0M5 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
RSPO4Q2I0M5 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
RSPO4Q2I0M5 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RSPO4Q2I0M5 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RSPO4Q2I0M5 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
RSPO4Q2I0M5 PANDAR-201ENST00000629595 1506 ntBASIC5.69□□□□□ -1.5
RSPO4Q2I0M5 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
RSPO4Q2I0M5 PHLPP2-201ENST00000393524 8467 ntTSL 2 BASIC5.69□□□□□ -1.5
RSPO4Q2I0M5 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
RSPO4Q2I0M5 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
RSPO4Q2I0M5 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC5.69□□□□□ -1.5
RSPO4Q2I0M5 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
RSPO4Q2I0M5 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
RSPO4Q2I0M5 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC5.69□□□□□ -1.5
RSPO4Q2I0M5 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC5.69□□□□□ -1.5
RSPO4Q2I0M5 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.69□□□□□ -1.5
RSPO4Q2I0M5 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
RSPO4Q2I0M5 LCP1-201ENST00000323076 3787 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RSPO4Q2I0M5 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RSPO4Q2I0M5 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
RSPO4Q2I0M5 IL2RA-203ENST00000379959 3176 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RSPO4Q2I0M5 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RSPO4Q2I0M5 SNRPEP3-201ENST00000338402 276 ntBASIC5.69□□□□□ -1.5
RSPO4Q2I0M5 RNU1-115P-201ENST00000365329 160 ntBASIC5.69□□□□□ -1.5
RSPO4Q2I0M5 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
RSPO4Q2I0M5 Y_RNA.478-201ENST00000384358 107 ntBASIC5.69□□□□□ -1.5
RSPO4Q2I0M5 Y_RNA.506-201ENST00000384494 102 ntBASIC5.69□□□□□ -1.5
RSPO4Q2I0M5 MIR506-201ENST00000384998 124 ntBASIC5.69□□□□□ -1.5
RSPO4Q2I0M5 NDUFS5P1-201ENST00000405668 289 ntBASIC5.69□□□□□ -1.5
RSPO4Q2I0M5 AC093162.1-201ENST00000419682 124 ntBASIC5.69□□□□□ -1.5
RSPO4Q2I0M5 ACTR3BP6-201ENST00000422332 1241 ntBASIC5.69□□□□□ -1.5
RSPO4Q2I0M5 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
RSPO4Q2I0M5 RPL7L1P10-201ENST00000427790 463 ntBASIC5.69□□□□□ -1.5
RSPO4Q2I0M5 RPS15AP10-201ENST00000432472 382 ntBASIC5.69□□□□□ -1.5
RSPO4Q2I0M5 AC119618.1-201ENST00000434191 222 ntBASIC5.69□□□□□ -1.5
RSPO4Q2I0M5 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC5.69□□□□□ -1.5
RSPO4Q2I0M5 RPL21P2-201ENST00000440049 481 ntBASIC5.69□□□□□ -1.5
RSPO4Q2I0M5 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC5.69□□□□□ -1.5
RSPO4Q2I0M5 RPL7P59-201ENST00000447700 943 ntBASIC5.69□□□□□ -1.5
RSPO4Q2I0M5 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
RSPO4Q2I0M5 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC5.69□□□□□ -1.5
RSPO4Q2I0M5 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC5.69□□□□□ -1.5
RSPO4Q2I0M5 RNU6-1212P-201ENST00000517023 104 ntBASIC5.69□□□□□ -1.5
RSPO4Q2I0M5 RN7SKP98-201ENST00000517070 156 ntBASIC5.69□□□□□ -1.5
RSPO4Q2I0M5 RNU6-699P-201ENST00000517081 110 ntBASIC5.69□□□□□ -1.5
RSPO4Q2I0M5 IGHV3-63-201ENST00000518422 341 ntBASIC5.69□□□□□ -1.5
RSPO4Q2I0M5 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC5.69□□□□□ -1.5
RSPO4Q2I0M5 AP000857.1-201ENST00000532151 543 ntBASIC5.69□□□□□ -1.5
RSPO4Q2I0M5 AC123904.2-201ENST00000548059 300 ntBASIC5.69□□□□□ -1.5
RSPO4Q2I0M5 MIR3118-1-201ENST00000581787 76 ntBASIC5.69□□□□□ -1.5
RSPO4Q2I0M5 MIR4260-201ENST00000583107 67 ntBASIC5.69□□□□□ -1.5
RSPO4Q2I0M5 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC5.69□□□□□ -1.5
RSPO4Q2I0M5 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC5.69□□□□□ -1.5
RSPO4Q2I0M5 AL031176.1-201ENST00000604554 466 ntBASIC5.69□□□□□ -1.5
RSPO4Q2I0M5 IGHV3-29-201ENST00000604817 344 ntBASIC5.69□□□□□ -1.5
RSPO4Q2I0M5 AC018690.1-201ENST00000608144 626 ntBASIC5.69□□□□□ -1.5
RSPO4Q2I0M5 WWOX-217ENST00000620008 450 ntTSL 2 BASIC5.69□□□□□ -1.5
RSPO4Q2I0M5 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC5.69□□□□□ -1.5
RSPO4Q2I0M5 AC103858.2-201ENST00000621471 543 ntBASIC5.69□□□□□ -1.5
RSPO4Q2I0M5 AC073869.10-201ENST00000642016 354 ntBASIC5.69□□□□□ -1.5
RSPO4Q2I0M5 AC091812.1-201ENST00000432235 1948 ntBASIC5.69□□□□□ -1.5
RSPO4Q2I0M5 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RSPO4Q2I0M5 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
RSPO4Q2I0M5 CDY2A-201ENST00000250838 1954 ntAPPRIS ALT1 BASIC5.69□□□□□ -1.5
RSPO4Q2I0M5 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
RSPO4Q2I0M5 AL391262.1-201ENST00000556558 1992 ntBASIC5.69□□□□□ -1.5
RSPO4Q2I0M5 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC5.69□□□□□ -1.5
RSPO4Q2I0M5 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
RSPO4Q2I0M5 SORBS1-203ENST00000354106 3015 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
RSPO4Q2I0M5 XPOTP1-201ENST00000443317 2398 ntBASIC5.69□□□□□ -1.5
RSPO4Q2I0M5 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RSPO4Q2I0M5 EXPH5-203ENST00000525344 6542 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
RSPO4Q2I0M5 HDAC1P2-201ENST00000453661 1398 ntBASIC5.68□□□□□ -1.5
RSPO4Q2I0M5 AC010624.4-201ENST00000597606 1351 ntBASIC5.68□□□□□ -1.5
RSPO4Q2I0M5 AL033543.1-201ENST00000623440 13454 ntBASIC5.68□□□□□ -1.5
RSPO4Q2I0M5 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
RSPO4Q2I0M5 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC5.68□□□□□ -1.5
RSPO4Q2I0M5 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RSPO4Q2I0M5 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC5.68□□□□□ -1.5
RSPO4Q2I0M5 RNA5SP478-201ENST00000364657 115 ntBASIC5.68□□□□□ -1.5
RSPO4Q2I0M5 RNU6-1027P-201ENST00000383998 107 ntBASIC5.68□□□□□ -1.5
RSPO4Q2I0M5 RNU6-1093P-201ENST00000391194 107 ntBASIC5.68□□□□□ -1.5
RSPO4Q2I0M5 RPL21P1-201ENST00000399532 476 ntBASIC5.68□□□□□ -1.5
RSPO4Q2I0M5 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC5.68□□□□□ -1.5
RSPO4Q2I0M5 AC092634.6-201ENST00000418558 192 ntBASIC5.68□□□□□ -1.5
RSPO4Q2I0M5 ARL5AP1-201ENST00000418991 388 ntBASIC5.68□□□□□ -1.5
RSPO4Q2I0M5 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC5.68□□□□□ -1.5
RSPO4Q2I0M5 NMD3P2-201ENST00000421815 761 ntBASIC5.68□□□□□ -1.5
RSPO4Q2I0M5 PSMA6P3-201ENST00000428242 164 ntBASIC5.68□□□□□ -1.5
RSPO4Q2I0M5 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC5.68□□□□□ -1.5
RSPO4Q2I0M5 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC5.68□□□□□ -1.5
RSPO4Q2I0M5 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC5.68□□□□□ -1.5
RSPO4Q2I0M5 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms