Protein–RNA interactions for Protein: Q12948

FOXC1, Forkhead box protein C1, humanhuman

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC1Q12948 ATAD1-202ENST00000328142 2939 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
FOXC1Q12948 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
FOXC1Q12948 MROH9-201ENST00000367758 2227 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
FOXC1Q12948 CDH18-205ENST00000506372 2432 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
FOXC1Q12948 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC6.19□□□□□ -1.42
FOXC1Q12948 TNPO1-204ENST00000506351 3028 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
FOXC1Q12948 DNM1L-202ENST00000358214 3229 ntTSL 5 BASIC6.19□□□□□ -1.42
FOXC1Q12948 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
FOXC1Q12948 SCIN-209ENST00000519209 2660 ntTSL 2 BASIC6.19□□□□□ -1.42
FOXC1Q12948 AP000560.1-201ENST00000624150 1937 ntBASIC6.19□□□□□ -1.42
FOXC1Q12948 MC2R-201ENST00000327606 3656 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
FOXC1Q12948 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC6.19□□□□□ -1.42
FOXC1Q12948 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC6.19□□□□□ -1.42
FOXC1Q12948 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
FOXC1Q12948 GABPAP-201ENST00000419271 1356 ntBASIC6.18□□□□□ -1.42
FOXC1Q12948 AL391262.1-201ENST00000556558 1992 ntBASIC6.18□□□□□ -1.42
FOXC1Q12948 NLRC4-204ENST00000404025 3581 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
FOXC1Q12948 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC6.18□□□□□ -1.42
FOXC1Q12948 SLC4A10-201ENST00000272716 3414 ntTSL 5 BASIC6.18□□□□□ -1.42
FOXC1Q12948 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
FOXC1Q12948 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
FOXC1Q12948 ATP2B4-204ENST00000367218 8918 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
FOXC1Q12948 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
FOXC1Q12948 VTCN1-201ENST00000328189 2289 ntTSL 5 BASIC6.18□□□□□ -1.42
FOXC1Q12948 NOS1-206ENST00000618760 12283 ntTSL 5 BASIC6.18□□□□□ -1.42
FOXC1Q12948 AC006484.1-201ENST00000435086 1884 ntBASIC6.18□□□□□ -1.42
FOXC1Q12948 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
FOXC1Q12948 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
FOXC1Q12948 GRIA4-212ENST00000530497 5059 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
FOXC1Q12948 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
FOXC1Q12948 Y_RNA.458-201ENST00000384240 102 ntBASIC6.18□□□□□ -1.42
FOXC1Q12948 Y_RNA.541-201ENST00000384640 113 ntBASIC6.18□□□□□ -1.42
FOXC1Q12948 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
FOXC1Q12948 AL080315.1-201ENST00000406055 466 ntBASIC6.18□□□□□ -1.42
FOXC1Q12948 OR3A2-201ENST00000408891 1076 ntBASIC6.18□□□□□ -1.42
FOXC1Q12948 RNU6-1135P-201ENST00000411083 103 ntBASIC6.18□□□□□ -1.42
FOXC1Q12948 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC6.18□□□□□ -1.42
FOXC1Q12948 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC6.18□□□□□ -1.42
FOXC1Q12948 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC6.18□□□□□ -1.42
FOXC1Q12948 RPS27P18-201ENST00000431701 247 ntBASIC6.18□□□□□ -1.42
FOXC1Q12948 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC6.18□□□□□ -1.42
FOXC1Q12948 NDUFB4P9-201ENST00000511646 388 ntBASIC6.18□□□□□ -1.42
FOXC1Q12948 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC6.18□□□□□ -1.42
FOXC1Q12948 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC6.18□□□□□ -1.42
FOXC1Q12948 AC136932.1-201ENST00000574771 208 ntBASIC6.18□□□□□ -1.42
FOXC1Q12948 MIR4300-201ENST00000581016 96 ntBASIC6.18□□□□□ -1.42
FOXC1Q12948 MRPS5P4-201ENST00000592830 325 ntBASIC6.18□□□□□ -1.42
FOXC1Q12948 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC6.18□□□□□ -1.42
FOXC1Q12948 RNA5SP440-201ENST00000612665 119 ntBASIC6.18□□□□□ -1.42
FOXC1Q12948 MIR1244-1-201ENST00000612829 85 ntBASIC6.18□□□□□ -1.42
FOXC1Q12948 AC118658.2-201ENST00000618697 459 ntBASIC6.18□□□□□ -1.42
FOXC1Q12948 AL512652.1-201ENST00000619006 500 ntBASIC6.18□□□□□ -1.42
FOXC1Q12948 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC6.18□□□□□ -1.42
FOXC1Q12948 MIR1244-3-201ENST00000635744 85 ntBASIC6.18□□□□□ -1.42
FOXC1Q12948 MIR1244-2-201ENST00000636449 85 ntBASIC6.18□□□□□ -1.42
FOXC1Q12948 MIR1244-4-202ENST00000636813 85 ntBASIC6.18□□□□□ -1.42
FOXC1Q12948 UTY-212ENST00000545955 6817 ntAPPRIS P5 TSL 1 (best) BASIC6.18□□□□□ -1.42
FOXC1Q12948 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
FOXC1Q12948 MUC21-201ENST00000376296 3651 ntAPPRIS P2 TSL 1 (best) BASIC6.18□□□□□ -1.42
FOXC1Q12948 ALG13-201ENST00000251943 3997 ntTSL 2 BASIC6.18□□□□□ -1.42
FOXC1Q12948 AC009948.3-201ENST00000603415 1798 ntBASIC6.18□□□□□ -1.42
FOXC1Q12948 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
FOXC1Q12948 SH3D19-210ENST00000514152 5107 ntAPPRIS ALT1 TSL 2 BASIC6.18□□□□□ -1.42
FOXC1Q12948 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
FOXC1Q12948 NCAPH-205ENST00000455200 2952 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
FOXC1Q12948 LINC02535-201ENST00000455071 2513 ntTSL 2 BASIC6.18□□□□□ -1.42
FOXC1Q12948 EZH1-222ENST00000592743 2501 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
FOXC1Q12948 ZNF350-201ENST00000243644 2338 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
FOXC1Q12948 NMD3-201ENST00000351193 3049 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
FOXC1Q12948 RACGAP1P-201ENST00000550663 1879 ntBASIC6.17□□□□□ -1.42
FOXC1Q12948 AC010168.2-201ENST00000562691 5428 ntBASIC6.17□□□□□ -1.42
FOXC1Q12948 C7-201ENST00000313164 4257 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
FOXC1Q12948 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC6.17□□□□□ -1.42
FOXC1Q12948 BEST1-202ENST00000449131 4267 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
FOXC1Q12948 AC090220.1-201ENST00000593078 1699 ntBASIC6.17□□□□□ -1.42
FOXC1Q12948 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
FOXC1Q12948 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
FOXC1Q12948 RPGRIP1L-202ENST00000379925 5297 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
FOXC1Q12948 GAPVD1-203ENST00000312123 4320 ntAPPRIS ALT1 TSL 1 (best) BASIC6.17□□□□□ -1.42
FOXC1Q12948 HKR1-201ENST00000324411 2929 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
FOXC1Q12948 BEST3-212ENST00000553096 2929 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
FOXC1Q12948 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
FOXC1Q12948 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC6.17□□□□□ -1.42
FOXC1Q12948 RNA5SP110-201ENST00000362638 115 ntBASIC6.17□□□□□ -1.42
FOXC1Q12948 Y_RNA.273-201ENST00000364703 102 ntBASIC6.17□□□□□ -1.42
FOXC1Q12948 DBIP1-201ENST00000401435 260 ntBASIC6.17□□□□□ -1.42
FOXC1Q12948 AL024474.1-201ENST00000404655 591 ntBASIC6.17□□□□□ -1.42
FOXC1Q12948 EEF1A1P29-201ENST00000416082 1096 ntBASIC6.17□□□□□ -1.42
FOXC1Q12948 AL359092.1-201ENST00000417156 265 ntBASIC6.17□□□□□ -1.42
FOXC1Q12948 DUTP4-201ENST00000424782 475 ntBASIC6.17□□□□□ -1.42
FOXC1Q12948 RPL35AP22-201ENST00000436855 335 ntBASIC6.17□□□□□ -1.42
FOXC1Q12948 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC6.17□□□□□ -1.42
FOXC1Q12948 AL390119.1-201ENST00000440329 312 ntBASIC6.17□□□□□ -1.42
FOXC1Q12948 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC6.17□□□□□ -1.42
FOXC1Q12948 RPL23AP60-201ENST00000450011 454 ntBASIC6.17□□□□□ -1.42
FOXC1Q12948 AP006222.1-205ENST00000450734 457 ntBASIC6.17□□□□□ -1.42
FOXC1Q12948 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC6.17□□□□□ -1.42
FOXC1Q12948 TRBV26-201ENST00000456572 344 ntBASIC6.17□□□□□ -1.42
FOXC1Q12948 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC6.17□□□□□ -1.42
FOXC1Q12948 RN7SL799P-201ENST00000475891 298 ntBASIC6.17□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms