Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CCNA1P78396 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4.01□□□□□ -1.77
CCNA1P78396 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.01□□□□□ -1.77
CCNA1P78396 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
CCNA1P78396 GNG5P1-201ENST00000255500 204 ntBASIC4.01□□□□□ -1.77
CCNA1P78396 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
CCNA1P78396 FRG1CP-201ENST00000358464 769 ntBASIC4.01□□□□□ -1.77
CCNA1P78396 HMGB1P10-201ENST00000395823 563 ntBASIC4.01□□□□□ -1.77
CCNA1P78396 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC4.01□□□□□ -1.77
CCNA1P78396 ZNF603P-201ENST00000405613 487 ntBASIC4.01□□□□□ -1.77
CCNA1P78396 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC4.01□□□□□ -1.77
CCNA1P78396 EI24P1-201ENST00000416584 867 ntBASIC4.01□□□□□ -1.77
CCNA1P78396 SDCBPP2-201ENST00000424643 885 ntBASIC4.01□□□□□ -1.77
CCNA1P78396 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC4.01□□□□□ -1.77
CCNA1P78396 ATP6V0E1P4-201ENST00000427294 242 ntBASIC4.01□□□□□ -1.77
CCNA1P78396 CKS1BP5-201ENST00000434172 273 ntBASIC4.01□□□□□ -1.77
CCNA1P78396 MRPS33P4-201ENST00000434892 317 ntBASIC4.01□□□□□ -1.77
CCNA1P78396 NDUFB1P1-201ENST00000435191 180 ntBASIC4.01□□□□□ -1.77
CCNA1P78396 AC006028.1-201ENST00000438379 402 ntBASIC4.01□□□□□ -1.77
CCNA1P78396 AC092809.1-201ENST00000441469 474 ntBASIC4.01□□□□□ -1.77
CCNA1P78396 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC4.01□□□□□ -1.77
CCNA1P78396 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC4.01□□□□□ -1.77
CCNA1P78396 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC4.01□□□□□ -1.77
CCNA1P78396 FCF1P8-201ENST00000510322 597 ntBASIC4.01□□□□□ -1.77
CCNA1P78396 RN7SKP277-201ENST00000516895 283 ntBASIC4.01□□□□□ -1.77
CCNA1P78396 OR5D17P-201ENST00000531492 978 ntBASIC4.01□□□□□ -1.77
CCNA1P78396 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
CCNA1P78396 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC4.01□□□□□ -1.77
CCNA1P78396 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC4.01□□□□□ -1.77
CCNA1P78396 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC4.01□□□□□ -1.77
CCNA1P78396 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC4.01□□□□□ -1.77
CCNA1P78396 AL513477.2-201ENST00000607858 568 ntBASIC4.01□□□□□ -1.77
CCNA1P78396 AL359715.5-201ENST00000623431 443 ntBASIC4.01□□□□□ -1.77
CCNA1P78396 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
CCNA1P78396 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
CCNA1P78396 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC4.01□□□□□ -1.77
CCNA1P78396 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.01□□□□□ -1.77
CCNA1P78396 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.01□□□□□ -1.77
CCNA1P78396 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.01□□□□□ -1.77
CCNA1P78396 MFSD8-233ENST00000641482 4860 ntBASIC4.01□□□□□ -1.77
CCNA1P78396 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC4.01□□□□□ -1.77
CCNA1P78396 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
CCNA1P78396 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
CCNA1P78396 AC000367.1-201ENST00000452711 1766 ntBASIC4□□□□□ -1.77
CCNA1P78396 Z83843.1-201ENST00000604070 3685 ntBASIC4□□□□□ -1.77
CCNA1P78396 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC4□□□□□ -1.77
CCNA1P78396 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4□□□□□ -1.77
CCNA1P78396 HSPE1P26-201ENST00000405341 275 ntBASIC4□□□□□ -1.77
CCNA1P78396 RN7SKP53-201ENST00000411337 315 ntBASIC4□□□□□ -1.77
CCNA1P78396 RNU2-6P-201ENST00000411404 190 ntBASIC4□□□□□ -1.77
CCNA1P78396 BX323014.1-201ENST00000412876 237 ntBASIC4□□□□□ -1.77
CCNA1P78396 AC241520.1-201ENST00000422654 1099 ntBASIC4□□□□□ -1.77
CCNA1P78396 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC4□□□□□ -1.77
CCNA1P78396 UBE2V2P3-201ENST00000433562 437 ntBASIC4□□□□□ -1.77
CCNA1P78396 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC4□□□□□ -1.77
CCNA1P78396 AC006994.1-201ENST00000438212 839 ntBASIC4□□□□□ -1.77
CCNA1P78396 HMGB1P48-201ENST00000446155 598 ntBASIC4□□□□□ -1.77
CCNA1P78396 HMGB3P22-202ENST00000451823 572 ntBASIC4□□□□□ -1.77
CCNA1P78396 RPL6P9-201ENST00000466502 859 ntBASIC4□□□□□ -1.77
CCNA1P78396 TAF8-207ENST00000482432 556 ntTSL 2 BASIC4□□□□□ -1.77
CCNA1P78396 AC069499.1-201ENST00000489433 509 ntBASIC4□□□□□ -1.77
CCNA1P78396 OR52A4P-203ENST00000498233 1014 ntBASIC4□□□□□ -1.77
CCNA1P78396 AC004069.2-201ENST00000505438 1114 ntBASIC4□□□□□ -1.77
CCNA1P78396 AC109458.1-201ENST00000508858 316 ntBASIC4□□□□□ -1.77
CCNA1P78396 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC4□□□□□ -1.77
CCNA1P78396 IGKV2-26-201ENST00000518305 343 ntBASIC4□□□□□ -1.77
CCNA1P78396 AC004923.2-201ENST00000529649 369 ntBASIC4□□□□□ -1.77
CCNA1P78396 UBE2NP1-201ENST00000545592 458 ntBASIC4□□□□□ -1.77
CCNA1P78396 AC025260.1-201ENST00000548858 430 ntBASIC4□□□□□ -1.77
CCNA1P78396 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC4□□□□□ -1.77
CCNA1P78396 AC009101.1-201ENST00000568135 242 ntBASIC4□□□□□ -1.77
CCNA1P78396 BNIP3P11-201ENST00000603878 563 ntBASIC4□□□□□ -1.77
CCNA1P78396 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC4□□□□□ -1.77
CCNA1P78396 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC4□□□□□ -1.77
CCNA1P78396 AC103858.2-201ENST00000621471 543 ntBASIC4□□□□□ -1.77
CCNA1P78396 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CCNA1P78396 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
CCNA1P78396 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CCNA1P78396 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CCNA1P78396 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
CCNA1P78396 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
CCNA1P78396 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CCNA1P78396 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
CCNA1P78396 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.99□□□□□ -1.77
CCNA1P78396 AC024341.1-201ENST00000526444 1552 ntBASIC3.99□□□□□ -1.77
CCNA1P78396 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CCNA1P78396 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CCNA1P78396 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CCNA1P78396 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CCNA1P78396 RNU6-98P-201ENST00000384173 107 ntBASIC3.99□□□□□ -1.77
CCNA1P78396 SNORA48.5-201ENST00000391143 135 ntBASIC3.99□□□□□ -1.77
CCNA1P78396 MTATP6P31-201ENST00000406985 692 ntBASIC3.99□□□□□ -1.77
CCNA1P78396 AL024507.1-201ENST00000412741 274 ntBASIC3.99□□□□□ -1.77
CCNA1P78396 MTCO3P4-201ENST00000419236 787 ntBASIC3.99□□□□□ -1.77
CCNA1P78396 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC3.99□□□□□ -1.77
CCNA1P78396 BX276092.4-201ENST00000452056 248 ntBASIC3.99□□□□□ -1.77
CCNA1P78396 RPL23AP62-201ENST00000463396 453 ntBASIC3.99□□□□□ -1.77
CCNA1P78396 SNRPGP3-201ENST00000469405 227 ntBASIC3.99□□□□□ -1.77
CCNA1P78396 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC3.99□□□□□ -1.77
CCNA1P78396 AC110794.1-201ENST00000505816 425 ntBASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms