Protein–RNA interactions for Protein: P62857

RPS28, 40S ribosomal protein S28, humanhuman

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28P62857 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
RPS28P62857 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC1.96□□□□□ -2.1
RPS28P62857 CU459211.1-201ENST00000635667 749 ntBASIC1.96□□□□□ -2.1
RPS28P62857 MIR203B-201ENST00000636080 86 ntBASIC1.96□□□□□ -2.1
RPS28P62857 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
RPS28P62857 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC1.96□□□□□ -2.1
RPS28P62857 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
RPS28P62857 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC1.96□□□□□ -2.1
RPS28P62857 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
RPS28P62857 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC1.95□□□□□ -2.1
RPS28P62857 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC1.95□□□□□ -2.1
RPS28P62857 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC1.95□□□□□ -2.1
RPS28P62857 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
RPS28P62857 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC1.95□□□□□ -2.1
RPS28P62857 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
RPS28P62857 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC1.95□□□□□ -2.1
RPS28P62857 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
RPS28P62857 TMSB4XP4-201ENST00000323496 618 ntBASIC1.95□□□□□ -2.1
RPS28P62857 RNU1-105P-201ENST00000363470 161 ntBASIC1.95□□□□□ -2.1
RPS28P62857 RNA5SP429-201ENST00000363688 109 ntBASIC1.95□□□□□ -2.1
RPS28P62857 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
RPS28P62857 DEFA7P-201ENST00000382676 285 ntBASIC1.95□□□□□ -2.1
RPS28P62857 MIR767-201ENST00000390228 109 ntBASIC1.95□□□□□ -2.1
RPS28P62857 U3.29-201ENST00000391296 212 ntBASIC1.95□□□□□ -2.1
RPS28P62857 PCNAP3-201ENST00000397222 778 ntBASIC1.95□□□□□ -2.1
RPS28P62857 PPIAP31-201ENST00000405422 495 ntBASIC1.95□□□□□ -2.1
RPS28P62857 U3.39-201ENST00000408569 239 ntBASIC1.95□□□□□ -2.1
RPS28P62857 RNA5SP181-201ENST00000410246 98 ntBASIC1.95□□□□□ -2.1
RPS28P62857 RNA5SP44-201ENST00000410446 133 ntBASIC1.95□□□□□ -2.1
RPS28P62857 RNU6-712P-201ENST00000410558 100 ntBASIC1.95□□□□□ -2.1
RPS28P62857 RNU4-72P-201ENST00000410754 173 ntBASIC1.95□□□□□ -2.1
RPS28P62857 TATDN1P1-201ENST00000414123 891 ntBASIC1.95□□□□□ -2.1
RPS28P62857 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC1.95□□□□□ -2.1
RPS28P62857 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC1.95□□□□□ -2.1
RPS28P62857 AC007394.1-201ENST00000421941 531 ntBASIC1.95□□□□□ -2.1
RPS28P62857 AC110995.1-202ENST00000422914 860 ntTSL 3 BASIC1.95□□□□□ -2.1
RPS28P62857 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC1.95□□□□□ -2.1
RPS28P62857 MORF4L1P7-201ENST00000426038 703 ntBASIC1.95□□□□□ -2.1
RPS28P62857 RNF19BPX-201ENST00000426224 625 ntBASIC1.95□□□□□ -2.1
RPS28P62857 HIGD1AP4-201ENST00000430194 280 ntBASIC1.95□□□□□ -2.1
RPS28P62857 LINC01827-201ENST00000432711 555 ntTSL 2 BASIC1.95□□□□□ -2.1
RPS28P62857 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC1.95□□□□□ -2.1
RPS28P62857 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC1.95□□□□□ -2.1
RPS28P62857 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC1.95□□□□□ -2.1
RPS28P62857 PNKDP1-201ENST00000435914 430 ntBASIC1.95□□□□□ -2.1
RPS28P62857 AL592437.1-201ENST00000443781 492 ntBASIC1.95□□□□□ -2.1
RPS28P62857 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC1.95□□□□□ -2.1
RPS28P62857 EEF1B2P5-201ENST00000444820 548 ntBASIC1.95□□□□□ -2.1
RPS28P62857 AC016683.1-201ENST00000446590 559 ntTSL 4 BASIC1.95□□□□□ -2.1
RPS28P62857 Z99127.3-201ENST00000448158 395 ntBASIC1.95□□□□□ -2.1
RPS28P62857 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC1.95□□□□□ -2.1
RPS28P62857 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC1.95□□□□□ -2.1
RPS28P62857 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC1.95□□□□□ -2.1
RPS28P62857 AC098847.1-201ENST00000473094 348 ntBASIC1.95□□□□□ -2.1
RPS28P62857 KC877373.1-201ENST00000479066 408 ntBASIC1.95□□□□□ -2.1
RPS28P62857 RN7SL776P-201ENST00000493390 268 ntBASIC1.95□□□□□ -2.1
RPS28P62857 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC1.95□□□□□ -2.1
RPS28P62857 AC016550.3-201ENST00000515706 767 ntBASIC1.95□□□□□ -2.1
RPS28P62857 AC090136.1-201ENST00000520009 240 ntBASIC1.95□□□□□ -2.1
RPS28P62857 FAM60DP-201ENST00000524174 632 ntBASIC1.95□□□□□ -2.1
RPS28P62857 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC1.95□□□□□ -2.1
RPS28P62857 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC1.95□□□□□ -2.1
RPS28P62857 AC022796.1-202ENST00000531882 477 ntTSL 5 BASIC1.95□□□□□ -2.1
RPS28P62857 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
RPS28P62857 AC068339.2-201ENST00000534395 618 ntBASIC1.95□□□□□ -2.1
RPS28P62857 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC1.95□□□□□ -2.1
RPS28P62857 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC1.95□□□□□ -2.1
RPS28P62857 CHEK2P2-201ENST00000554701 672 ntBASIC1.95□□□□□ -2.1
RPS28P62857 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC1.95□□□□□ -2.1
RPS28P62857 AL845552.1-201ENST00000556820 323 ntBASIC1.95□□□□□ -2.1
RPS28P62857 TRAV28-201ENST00000557548 323 ntBASIC1.95□□□□□ -2.1
RPS28P62857 AC023575.1-201ENST00000580510 358 ntBASIC1.95□□□□□ -2.1
RPS28P62857 MIR3689C-201ENST00000581239 72 ntBASIC1.95□□□□□ -2.1
RPS28P62857 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC1.95□□□□□ -2.1
RPS28P62857 TPMTP1-201ENST00000592307 737 ntBASIC1.95□□□□□ -2.1
RPS28P62857 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC1.95□□□□□ -2.1
RPS28P62857 RPS4XP16-202ENST00000595905 807 ntTSL 5 BASIC1.95□□□□□ -2.1
RPS28P62857 AL356280.1-201ENST00000603614 379 ntBASIC1.95□□□□□ -2.1
RPS28P62857 AL513477.2-201ENST00000607858 568 ntBASIC1.95□□□□□ -2.1
RPS28P62857 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC1.95□□□□□ -2.1
RPS28P62857 HMGB1P24-202ENST00000615653 685 ntBASIC1.95□□□□□ -2.1
RPS28P62857 AC025588.4-201ENST00000615802 908 ntBASIC1.95□□□□□ -2.1
RPS28P62857 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC1.95□□□□□ -2.1
RPS28P62857 Metazoa_SRP.42-201ENST00000621081 348 ntBASIC1.95□□□□□ -2.1
RPS28P62857 AC024023.1-201ENST00000624530 922 ntBASIC1.95□□□□□ -2.1
RPS28P62857 U3.53-201ENST00000628922 216 ntBASIC1.95□□□□□ -2.1
RPS28P62857 TC2N-202ENST00000360594 3751 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
RPS28P62857 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
RPS28P62857 AC244517.1-201ENST00000606030 2086 ntBASIC1.95□□□□□ -2.1
RPS28P62857 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
RPS28P62857 AC007336.1-201ENST00000576365 3828 ntBASIC1.95□□□□□ -2.1
RPS28P62857 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
RPS28P62857 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
RPS28P62857 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
RPS28P62857 AL022578.1-201ENST00000439330 1433 ntBASIC1.94□□□□□ -2.1
RPS28P62857 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
RPS28P62857 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
RPS28P62857 HMGB1P5-201ENST00000255320 642 ntBASIC1.94□□□□□ -2.1
RPS28P62857 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
RPS28P62857 SNORA38-201ENST00000363946 132 ntBASIC1.94□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms