Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.05□□□□□ -1.92
ACTBP60709 MIR3160-1-201ENST00000577972 85 ntBASIC3.05□□□□□ -1.92
ACTBP60709 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.05□□□□□ -1.92
ACTBP60709 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.05□□□□□ -1.92
ACTBP60709 VN1R85P-201ENST00000601587 426 ntBASIC3.05□□□□□ -1.92
ACTBP60709 AC067959.1-201ENST00000604334 379 ntBASIC3.05□□□□□ -1.92
ACTBP60709 AC006077.1-201ENST00000604746 343 ntBASIC3.05□□□□□ -1.92
ACTBP60709 IGHV3-29-201ENST00000604817 344 ntBASIC3.05□□□□□ -1.92
ACTBP60709 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.05□□□□□ -1.92
ACTBP60709 AL354798.1-201ENST00000622505 329 ntBASIC3.05□□□□□ -1.92
ACTBP60709 FP236240.3-201ENST00000623061 327 ntBASIC3.05□□□□□ -1.92
ACTBP60709 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
ACTBP60709 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.05□□□□□ -1.92
ACTBP60709 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.05□□□□□ -1.92
ACTBP60709 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC3.05□□□□□ -1.92
ACTBP60709 AC073055.1-201ENST00000456901 1621 ntBASIC3.04□□□□□ -1.92
ACTBP60709 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
ACTBP60709 AL355578.1-201ENST00000607405 1328 ntBASIC3.04□□□□□ -1.92
ACTBP60709 RNU6-50P-201ENST00000362356 103 ntBASIC3.04□□□□□ -1.92
ACTBP60709 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
ACTBP60709 RNU6-891P-201ENST00000384280 111 ntBASIC3.04□□□□□ -1.92
ACTBP60709 RNA5SP129-201ENST00000410276 118 ntBASIC3.04□□□□□ -1.92
ACTBP60709 RNU2-21P-201ENST00000410368 188 ntBASIC3.04□□□□□ -1.92
ACTBP60709 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC3.04□□□□□ -1.92
ACTBP60709 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC3.04□□□□□ -1.92
ACTBP60709 B3GNT2P1-201ENST00000434960 952 ntBASIC3.04□□□□□ -1.92
ACTBP60709 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.04□□□□□ -1.92
ACTBP60709 RPL23AP22-201ENST00000437556 453 ntBASIC3.04□□□□□ -1.92
ACTBP60709 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC3.04□□□□□ -1.92
ACTBP60709 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.04□□□□□ -1.92
ACTBP60709 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.04□□□□□ -1.92
ACTBP60709 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.04□□□□□ -1.92
ACTBP60709 MTND3P6-201ENST00000485242 339 ntBASIC3.04□□□□□ -1.92
ACTBP60709 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC3.04□□□□□ -1.92
ACTBP60709 SETP14-201ENST00000497538 873 ntBASIC3.04□□□□□ -1.92
ACTBP60709 AC111193.1-201ENST00000504097 155 ntBASIC3.04□□□□□ -1.92
ACTBP60709 AC147055.1-201ENST00000509261 750 ntBASIC3.04□□□□□ -1.92
ACTBP60709 AC026402.1-201ENST00000513642 170 ntBASIC3.04□□□□□ -1.92
ACTBP60709 RN7SKP21-201ENST00000516503 220 ntBASIC3.04□□□□□ -1.92
ACTBP60709 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC3.04□□□□□ -1.92
ACTBP60709 AC104115.2-201ENST00000523026 687 ntBASIC3.04□□□□□ -1.92
ACTBP60709 MTND2P26-201ENST00000528255 1029 ntBASIC3.04□□□□□ -1.92
ACTBP60709 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3.04□□□□□ -1.92
ACTBP60709 AC026333.2-201ENST00000542164 106 ntBASIC3.04□□□□□ -1.92
ACTBP60709 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.04□□□□□ -1.92
ACTBP60709 AC008507.1-201ENST00000587506 734 ntBASIC3.04□□□□□ -1.92
ACTBP60709 AC090912.3-201ENST00000609775 533 ntBASIC3.04□□□□□ -1.92
ACTBP60709 VIS1.1-201ENST00000610517 203 ntBASIC3.04□□□□□ -1.92
ACTBP60709 AC005344.1-201ENST00000613391 459 ntBASIC3.04□□□□□ -1.92
ACTBP60709 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC3.04□□□□□ -1.92
ACTBP60709 AP003355.3-201ENST00000623465 114 ntBASIC3.04□□□□□ -1.92
ACTBP60709 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.04□□□□□ -1.92
ACTBP60709 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.04□□□□□ -1.92
ACTBP60709 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
ACTBP60709 AC007656.2-201ENST00000624902 4547 ntBASIC3.04□□□□□ -1.92
ACTBP60709 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
ACTBP60709 AP004289.2-201ENST00000444413 1457 ntBASIC3.03□□□□□ -1.92
ACTBP60709 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.03□□□□□ -1.92
ACTBP60709 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
ACTBP60709 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
ACTBP60709 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.03□□□□□ -1.92
ACTBP60709 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
ACTBP60709 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
ACTBP60709 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
ACTBP60709 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
ACTBP60709 MIR30B-201ENST00000384850 88 ntBASIC3.03□□□□□ -1.92
ACTBP60709 AL121972.1-201ENST00000402023 252 ntBASIC3.03□□□□□ -1.92
ACTBP60709 RNU4-65P-201ENST00000410473 140 ntBASIC3.03□□□□□ -1.92
ACTBP60709 MTND4P22-201ENST00000413116 1169 ntBASIC3.03□□□□□ -1.92
ACTBP60709 AC126124.2-201ENST00000413542 321 ntBASIC3.03□□□□□ -1.92
ACTBP60709 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.03□□□□□ -1.92
ACTBP60709 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.03□□□□□ -1.92
ACTBP60709 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.03□□□□□ -1.92
ACTBP60709 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
ACTBP60709 RPL7P46-201ENST00000425129 740 ntBASIC3.03□□□□□ -1.92
ACTBP60709 BX890604.2-201ENST00000427883 474 ntBASIC3.03□□□□□ -1.92
ACTBP60709 AP000907.1-201ENST00000428428 510 ntBASIC3.03□□□□□ -1.92
ACTBP60709 OR4F13P-201ENST00000428478 931 ntBASIC3.03□□□□□ -1.92
ACTBP60709 RPL23AP69-201ENST00000431134 458 ntBASIC3.03□□□□□ -1.92
ACTBP60709 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC3.03□□□□□ -1.92
ACTBP60709 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
ACTBP60709 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC3.03□□□□□ -1.92
ACTBP60709 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC3.03□□□□□ -1.92
ACTBP60709 AL627224.1-201ENST00000448334 444 ntBASIC3.03□□□□□ -1.92
ACTBP60709 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC3.03□□□□□ -1.92
ACTBP60709 NECAP1P2-201ENST00000455668 727 ntBASIC3.03□□□□□ -1.92
ACTBP60709 AL672167.3-201ENST00000465951 960 ntBASIC3.03□□□□□ -1.92
ACTBP60709 AL024509.2-201ENST00000493462 493 ntBASIC3.03□□□□□ -1.92
ACTBP60709 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC3.03□□□□□ -1.92
ACTBP60709 RN7SKP13-201ENST00000515933 244 ntBASIC3.03□□□□□ -1.92
ACTBP60709 SNORA64.4-201ENST00000516632 81 ntBASIC3.03□□□□□ -1.92
ACTBP60709 RNU6-352P-201ENST00000516908 107 ntBASIC3.03□□□□□ -1.92
ACTBP60709 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
ACTBP60709 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC3.03□□□□□ -1.92
ACTBP60709 AC109635.4-202ENST00000531666 412 ntBASIC3.03□□□□□ -1.92
ACTBP60709 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC3.03□□□□□ -1.92
ACTBP60709 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC3.03□□□□□ -1.92
ACTBP60709 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC3.03□□□□□ -1.92
ACTBP60709 TRAV37-201ENST00000553906 342 ntBASIC3.03□□□□□ -1.92
ACTBP60709 AC037471.2-201ENST00000564941 598 ntBASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 117.8 ms