Protein–RNA interactions for Protein: P31277

HOXD11, Homeobox protein Hox-D11, humanhuman

Predicted RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD11P31277 KLHL1-202ENST00000545028 3966 ntTSL 2 BASIC8.31□□□□□ -1.08
HOXD11P31277 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC8.31□□□□□ -1.08
HOXD11P31277 ENSA-204ENST00000356527 2546 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
HOXD11P31277 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
HOXD11P31277 SPATA13-201ENST00000343003 6405 ntAPPRIS ALT2 TSL 2 BASIC8.3□□□□□ -1.08
HOXD11P31277 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
HOXD11P31277 SHROOM4-203ENST00000460112 8919 ntTSL 5 BASIC8.3□□□□□ -1.08
HOXD11P31277 RTTN-222ENST00000640769 8088 ntAPPRIS P1 TSL 2 BASIC8.3□□□□□ -1.08
HOXD11P31277 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC8.3□□□□□ -1.08
HOXD11P31277 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
HOXD11P31277 EIF1-203ENST00000469257 2330 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
HOXD11P31277 GLE1-201ENST00000309971 3321 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
HOXD11P31277 SNX25-202ENST00000504273 3323 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
HOXD11P31277 SORBS1-211ENST00000371247 7354 ntAPPRIS ALT2 TSL 5 BASIC8.3□□□□□ -1.08
HOXD11P31277 OPTN-202ENST00000378747 3400 ntAPPRIS P2 TSL 1 (best) BASIC8.3□□□□□ -1.08
HOXD11P31277 ZNF674-207ENST00000523374 4073 ntAPPRIS P3 TSL 1 (best) BASIC8.3□□□□□ -1.08
HOXD11P31277 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
HOXD11P31277 AC092807.3-203ENST00000467530 2745 ntTSL 2 BASIC8.3□□□□□ -1.08
HOXD11P31277 RNA5SP435-201ENST00000364044 108 ntBASIC8.3□□□□□ -1.08
HOXD11P31277 SNORA36A-201ENST00000384221 132 ntBASIC8.3□□□□□ -1.08
HOXD11P31277 RNU6-712P-201ENST00000410558 100 ntBASIC8.3□□□□□ -1.08
HOXD11P31277 AC126124.2-201ENST00000413542 321 ntBASIC8.3□□□□□ -1.08
HOXD11P31277 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC8.3□□□□□ -1.08
HOXD11P31277 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC8.3□□□□□ -1.08
HOXD11P31277 MTATP6P21-201ENST00000440681 189 ntBASIC8.3□□□□□ -1.08
HOXD11P31277 PFN1P1-201ENST00000442087 423 ntBASIC8.3□□□□□ -1.08
HOXD11P31277 AC004947.1-202ENST00000457000 576 ntTSL 4 BASIC8.3□□□□□ -1.08
HOXD11P31277 RN7SL141P-201ENST00000484215 266 ntBASIC8.3□□□□□ -1.08
HOXD11P31277 COX6C-203ENST00000518171 724 ntAPPRIS P1 TSL 2 BASIC8.3□□□□□ -1.08
HOXD11P31277 AC087360.1-201ENST00000518788 616 ntBASIC8.3□□□□□ -1.08
HOXD11P31277 AC010333.1-201ENST00000563116 563 ntTSL 4 BASIC8.3□□□□□ -1.08
HOXD11P31277 PACRG-210ENST00000611387 279 ntTSL 5 BASIC8.3□□□□□ -1.08
HOXD11P31277 uc_338.26-201ENST00000612659 160 ntBASIC8.3□□□□□ -1.08
HOXD11P31277 AL035470.1-201ENST00000622571 220 ntBASIC8.3□□□□□ -1.08
HOXD11P31277 AC026950.2-201ENST00000633456 470 ntTSL 3 BASIC8.3□□□□□ -1.08
HOXD11P31277 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC8.3□□□□□ -1.08
HOXD11P31277 RPAP1-202ENST00000561603 3906 ntTSL 5 BASIC8.3□□□□□ -1.08
HOXD11P31277 OLR1-201ENST00000309539 2462 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
HOXD11P31277 NFIA-206ENST00000371191 1916 ntTSL 5 BASIC8.3□□□□□ -1.08
HOXD11P31277 MAPK10-261ENST00000641050 3109 ntBASIC8.3□□□□□ -1.08
HOXD11P31277 OR7D2-201ENST00000344248 3224 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
HOXD11P31277 NPR3-202ENST00000326958 6380 ntTSL 2 BASIC8.3□□□□□ -1.08
HOXD11P31277 SKAP2-201ENST00000345317 3998 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
HOXD11P31277 GIGYF2-201ENST00000373563 5847 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
HOXD11P31277 NCAPH-201ENST00000240423 2763 ntAPPRIS P2 TSL 1 (best) BASIC8.3□□□□□ -1.08
HOXD11P31277 DLG2-202ENST00000330014 2789 ntTSL 2 BASIC8.3□□□□□ -1.08
HOXD11P31277 PYROXD1-201ENST00000240651 4055 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
HOXD11P31277 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC8.3□□□□□ -1.08
HOXD11P31277 LIMCH1-219ENST00000514096 3543 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
HOXD11P31277 AC011592.1-201ENST00000624647 3634 ntBASIC8.3□□□□□ -1.08
HOXD11P31277 ZNF415-202ENST00000421033 2402 ntAPPRIS P3 TSL 4 BASIC8.3□□□□□ -1.08
HOXD11P31277 PLAGL1-205ENST00000392307 6296 ntTSL 2 BASIC8.3□□□□□ -1.08
HOXD11P31277 MYOM1-201ENST00000261606 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
HOXD11P31277 AC005520.1-201ENST00000556551 3695 ntAPPRIS P1 TSL 2 BASIC8.3□□□□□ -1.08
HOXD11P31277 KCTD19-201ENST00000304372 2958 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
HOXD11P31277 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC8.29□□□□□ -1.08
HOXD11P31277 TEX11-204ENST00000395889 3133 ntAPPRIS P3 TSL 2 BASIC8.29□□□□□ -1.08
HOXD11P31277 BTN2A1-203ENST00000429381 3113 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
HOXD11P31277 EGF-204ENST00000503392 3642 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
HOXD11P31277 TRIM55-203ENST00000350034 1177 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
HOXD11P31277 RNA5SP429-201ENST00000363688 109 ntBASIC8.29□□□□□ -1.08
HOXD11P31277 Y_RNA.432-201ENST00000384087 111 ntBASIC8.29□□□□□ -1.08
HOXD11P31277 SNORA51.7-201ENST00000384171 134 ntBASIC8.29□□□□□ -1.08
HOXD11P31277 AL355433.1-201ENST00000422804 300 ntBASIC8.29□□□□□ -1.08
HOXD11P31277 CYP4F32P-201ENST00000426492 504 ntBASIC8.29□□□□□ -1.08
HOXD11P31277 RPL23AP62-201ENST00000463396 453 ntBASIC8.29□□□□□ -1.08
HOXD11P31277 AL049874.1-201ENST00000489560 388 ntBASIC8.29□□□□□ -1.08
HOXD11P31277 RNU6-504P-201ENST00000516568 104 ntBASIC8.29□□□□□ -1.08
HOXD11P31277 AC018442.3-201ENST00000523025 183 ntBASIC8.29□□□□□ -1.08
HOXD11P31277 PPP1R1AP1-201ENST00000525622 425 ntBASIC8.29□□□□□ -1.08
HOXD11P31277 MIR6505-201ENST00000617206 71 ntBASIC8.29□□□□□ -1.08
HOXD11P31277 AC129908.1-201ENST00000624553 648 ntBASIC8.29□□□□□ -1.08
HOXD11P31277 FKBP1AP4-201ENST00000631775 336 ntBASIC8.29□□□□□ -1.08
HOXD11P31277 MIR1910-201ENST00000636955 80 ntBASIC8.29□□□□□ -1.08
HOXD11P31277 CBFA2T2-209ENST00000492345 7803 ntTSL 5 BASIC8.29□□□□□ -1.08
HOXD11P31277 COG2-209ENST00000534989 2963 ntTSL 2 BASIC8.29□□□□□ -1.08
HOXD11P31277 GP2-201ENST00000302555 3406 ntAPPRIS P3 TSL 1 (best) BASIC8.29□□□□□ -1.08
HOXD11P31277 TRPS1-208ENST00000519076 3329 ntTSL 5 BASIC8.29□□□□□ -1.08
HOXD11P31277 NME8-201ENST00000199447 2312 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
HOXD11P31277 IYD-201ENST00000229447 7513 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
HOXD11P31277 Z97832.2-201ENST00000605896 4261 ntBASIC8.29□□□□□ -1.08
HOXD11P31277 HELQ-201ENST00000295488 3579 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
HOXD11P31277 TNPO3-204ENST00000482320 3585 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
HOXD11P31277 ZNF780A-206ENST00000595687 3472 ntAPPRIS P3 TSL 2 BASIC8.28□□□□□ -1.08
HOXD11P31277 INSIG2-201ENST00000245787 2590 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
HOXD11P31277 UBE2V1-204ENST00000371677 2459 ntTSL 2 BASIC8.28□□□□□ -1.08
HOXD11P31277 TENM2-203ENST00000518659 8550 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
HOXD11P31277 KDM4C-202ENST00000381309 4655 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
HOXD11P31277 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
HOXD11P31277 ZNF441-201ENST00000357901 4356 ntAPPRIS P1 TSL 3 BASIC8.28□□□□□ -1.08
HOXD11P31277 ADGRF2-204ENST00000507065 3043 ntTSL 5 BASIC8.28□□□□□ -1.08
HOXD11P31277 ODF2-220ENST00000604420 3030 ntTSL 2 BASIC8.28□□□□□ -1.08
HOXD11P31277 NHLRC2-201ENST00000369301 11051 ntAPPRIS P1 TSL 2 BASIC8.28□□□□□ -1.08
HOXD11P31277 AC129502.1-201ENST00000623261 1654 ntBASIC8.28□□□□□ -1.08
HOXD11P31277 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC8.28□□□□□ -1.08
HOXD11P31277 ACSL5-203ENST00000356116 3353 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
HOXD11P31277 CAST-213ENST00000504465 2336 ntAPPRIS ALT2 TSL 2 BASIC8.28□□□□□ -1.08
HOXD11P31277 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
HOXD11P31277 RNU1-140P-201ENST00000365040 165 ntBASIC8.28□□□□□ -1.08
HOXD11P31277 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 9.6 ms