Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 BNIP3P38-201ENST00000601117 544 ntBASIC4.24□□□□□ -1.73
COL5A2P05997 AC015849.2-201ENST00000605738 409 ntBASIC4.24□□□□□ -1.73
COL5A2P05997 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC4.24□□□□□ -1.73
COL5A2P05997 AC097372.4-201ENST00000625025 466 ntBASIC4.24□□□□□ -1.73
COL5A2P05997 OR4G3P-201ENST00000633500 913 ntBASIC4.24□□□□□ -1.73
COL5A2P05997 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
COL5A2P05997 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
COL5A2P05997 AL645568.2-201ENST00000432815 1337 ntBASIC4.24□□□□□ -1.73
COL5A2P05997 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
COL5A2P05997 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
COL5A2P05997 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC4.24□□□□□ -1.73
COL5A2P05997 AL512504.1-201ENST00000415494 778 ntBASIC4.24□□□□□ -1.73
COL5A2P05997 AL121882.1-201ENST00000422893 417 ntBASIC4.24□□□□□ -1.73
COL5A2P05997 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC4.24□□□□□ -1.73
COL5A2P05997 AL450263.2-201ENST00000439400 589 ntBASIC4.24□□□□□ -1.73
COL5A2P05997 RNF148-202ENST00000447240 839 ntTSL 2 BASIC4.24□□□□□ -1.73
COL5A2P05997 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC4.24□□□□□ -1.73
COL5A2P05997 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC4.24□□□□□ -1.73
COL5A2P05997 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC4.24□□□□□ -1.73
COL5A2P05997 AC068587.2-201ENST00000478386 781 ntBASIC4.24□□□□□ -1.73
COL5A2P05997 AC117525.1-201ENST00000515228 503 ntBASIC4.24□□□□□ -1.73
COL5A2P05997 RPL12P22-201ENST00000519073 490 ntBASIC4.24□□□□□ -1.73
COL5A2P05997 AC022882.1-201ENST00000532142 501 ntBASIC4.24□□□□□ -1.73
COL5A2P05997 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC4.24□□□□□ -1.73
COL5A2P05997 H3F3AP1-201ENST00000559984 334 ntBASIC4.24□□□□□ -1.73
COL5A2P05997 AC124856.1-201ENST00000600819 896 ntBASIC4.24□□□□□ -1.73
COL5A2P05997 AC034236.3-201ENST00000605999 461 ntBASIC4.24□□□□□ -1.73
COL5A2P05997 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
COL5A2P05997 AL138955.1-201ENST00000622881 1040 ntBASIC4.24□□□□□ -1.73
COL5A2P05997 AC006840.1-201ENST00000623069 542 ntBASIC4.24□□□□□ -1.73
COL5A2P05997 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
COL5A2P05997 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
COL5A2P05997 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.23□□□□□ -1.73
COL5A2P05997 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
COL5A2P05997 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
COL5A2P05997 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC4.23□□□□□ -1.73
COL5A2P05997 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
COL5A2P05997 OR5J1P-201ENST00000313544 939 ntBASIC4.23□□□□□ -1.73
COL5A2P05997 AL035405.1-201ENST00000400795 710 ntBASIC4.23□□□□□ -1.73
COL5A2P05997 RNU6-584P-201ENST00000410350 95 ntBASIC4.23□□□□□ -1.73
COL5A2P05997 RNA5SP104-201ENST00000410989 118 ntBASIC4.23□□□□□ -1.73
COL5A2P05997 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC4.23□□□□□ -1.73
COL5A2P05997 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC4.23□□□□□ -1.73
COL5A2P05997 AC114973.1-201ENST00000429057 632 ntBASIC4.23□□□□□ -1.73
COL5A2P05997 AC013410.1-201ENST00000436223 1232 ntBASIC4.23□□□□□ -1.73
COL5A2P05997 AL135938.1-201ENST00000443141 297 ntBASIC4.23□□□□□ -1.73
COL5A2P05997 AC098826.2-201ENST00000452011 651 ntBASIC4.23□□□□□ -1.73
COL5A2P05997 AC087312.1-201ENST00000471411 480 ntBASIC4.23□□□□□ -1.73
COL5A2P05997 SSR3-208ENST00000496050 579 ntTSL 4 BASIC4.23□□□□□ -1.73
COL5A2P05997 AC113430.1-201ENST00000506872 718 ntBASIC4.23□□□□□ -1.73
COL5A2P05997 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
COL5A2P05997 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
COL5A2P05997 HMGB1P19-201ENST00000517578 577 ntBASIC4.23□□□□□ -1.73
COL5A2P05997 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
COL5A2P05997 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.23□□□□□ -1.73
COL5A2P05997 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.23□□□□□ -1.73
COL5A2P05997 CKS1BP1-201ENST00000555221 240 ntBASIC4.23□□□□□ -1.73
COL5A2P05997 AC006116.7-201ENST00000590141 756 ntBASIC4.23□□□□□ -1.73
COL5A2P05997 AC133794.1-201ENST00000602731 914 ntBASIC4.23□□□□□ -1.73
COL5A2P05997 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.23□□□□□ -1.73
COL5A2P05997 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.23□□□□□ -1.73
COL5A2P05997 AC099654.8-201ENST00000637757 681 ntBASIC4.23□□□□□ -1.73
COL5A2P05997 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
COL5A2P05997 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC4.23□□□□□ -1.73
COL5A2P05997 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
COL5A2P05997 AC017071.1-201ENST00000564407 2204 ntBASIC4.23□□□□□ -1.73
COL5A2P05997 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.23□□□□□ -1.73
COL5A2P05997 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
COL5A2P05997 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.22□□□□□ -1.73
COL5A2P05997 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
COL5A2P05997 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
COL5A2P05997 AC018529.3-201ENST00000624212 2254 ntBASIC4.22□□□□□ -1.73
COL5A2P05997 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
COL5A2P05997 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC4.22□□□□□ -1.73
COL5A2P05997 Y_RNA.62-201ENST00000362840 99 ntBASIC4.22□□□□□ -1.73
COL5A2P05997 RNU6-670P-201ENST00000364312 104 ntBASIC4.22□□□□□ -1.73
COL5A2P05997 MIR122-201ENST00000385044 85 ntBASIC4.22□□□□□ -1.73
COL5A2P05997 CCNB2P1-201ENST00000399411 1150 ntBASIC4.22□□□□□ -1.73
COL5A2P05997 AL139095.1-201ENST00000404326 391 ntBASIC4.22□□□□□ -1.73
COL5A2P05997 CLIC4P1-201ENST00000453177 535 ntBASIC4.22□□□□□ -1.73
COL5A2P05997 RPL5P30-201ENST00000465511 891 ntBASIC4.22□□□□□ -1.73
COL5A2P05997 RPL31P50-201ENST00000471002 296 ntBASIC4.22□□□□□ -1.73
COL5A2P05997 TRBV8-1-201ENST00000481590 279 ntBASIC4.22□□□□□ -1.73
COL5A2P05997 AC093534.1-201ENST00000504977 132 ntBASIC4.22□□□□□ -1.73
COL5A2P05997 NAMPTP2-201ENST00000505629 1115 ntBASIC4.22□□□□□ -1.73
COL5A2P05997 AC112198.4-201ENST00000515450 351 ntBASIC4.22□□□□□ -1.73
COL5A2P05997 RNU6-1102P-201ENST00000516149 96 ntBASIC4.22□□□□□ -1.73
COL5A2P05997 CIR1P1-201ENST00000524055 1133 ntBASIC4.22□□□□□ -1.73
COL5A2P05997 AP001372.4-201ENST00000524889 472 ntBASIC4.22□□□□□ -1.73
COL5A2P05997 AP000859.1-201ENST00000525536 307 ntBASIC4.22□□□□□ -1.73
COL5A2P05997 MTND1P24-201ENST00000552175 861 ntBASIC4.22□□□□□ -1.73
COL5A2P05997 MTND3P12-201ENST00000559068 328 ntBASIC4.22□□□□□ -1.73
COL5A2P05997 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC4.22□□□□□ -1.73
COL5A2P05997 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC4.22□□□□□ -1.73
COL5A2P05997 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC4.22□□□□□ -1.73
COL5A2P05997 AC103881.1-201ENST00000603476 538 ntBASIC4.22□□□□□ -1.73
COL5A2P05997 AC009948.4-201ENST00000604692 675 ntBASIC4.22□□□□□ -1.73
COL5A2P05997 AC112220.2-201ENST00000605513 533 ntBASIC4.22□□□□□ -1.73
COL5A2P05997 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC4.22□□□□□ -1.73
COL5A2P05997 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms