Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 AP000926.3-201ENST00000497201 299 ntBASIC1.34□□□□□ -2.2
USH2AO75445 AC093815.1-201ENST00000508637 280 ntBASIC1.34□□□□□ -2.2
USH2AO75445 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.2
USH2AO75445 RFPL4AP3-201ENST00000515267 345 ntBASIC1.34□□□□□ -2.2
USH2AO75445 RNU1-143P-201ENST00000516296 146 ntBASIC1.34□□□□□ -2.2
USH2AO75445 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC1.34□□□□□ -2.2
USH2AO75445 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC1.34□□□□□ -2.2
USH2AO75445 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC1.34□□□□□ -2.2
USH2AO75445 PRELID3BP8-201ENST00000604148 295 ntBASIC1.34□□□□□ -2.2
USH2AO75445 Z82195.1-201ENST00000604558 398 ntBASIC1.34□□□□□ -2.2
USH2AO75445 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC1.34□□□□□ -2.2
USH2AO75445 snoU13.31-201ENST00000607291 104 ntBASIC1.34□□□□□ -2.2
USH2AO75445 U1.23-201ENST00000610293 146 ntBASIC1.34□□□□□ -2.2
USH2AO75445 RNU1-68P-201ENST00000615382 146 ntBASIC1.34□□□□□ -2.2
USH2AO75445 U1.39-201ENST00000621562 146 ntBASIC1.34□□□□□ -2.2
USH2AO75445 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC1.34□□□□□ -2.2
USH2AO75445 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC1.34□□□□□ -2.2
USH2AO75445 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.2
USH2AO75445 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.2
USH2AO75445 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC1.34□□□□□ -2.2
USH2AO75445 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC1.33□□□□□ -2.2
USH2AO75445 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC1.33□□□□□ -2.2
USH2AO75445 TRAV37-201ENST00000553906 342 ntBASIC1.33□□□□□ -2.2
USH2AO75445 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC1.33□□□□□ -2.2
USH2AO75445 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC1.33□□□□□ -2.2
USH2AO75445 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC1.33□□□□□ -2.2
USH2AO75445 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
USH2AO75445 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
USH2AO75445 OR5BR1P-201ENST00000524992 1330 ntBASIC1.33□□□□□ -2.2
USH2AO75445 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
USH2AO75445 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC1.33□□□□□ -2.2
USH2AO75445 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC1.33□□□□□ -2.2
USH2AO75445 RAC1P5-201ENST00000512182 576 ntBASIC1.33□□□□□ -2.2
USH2AO75445 RN7SKP283-201ENST00000517197 270 ntBASIC1.33□□□□□ -2.2
USH2AO75445 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC1.33□□□□□ -2.2
USH2AO75445 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC1.33□□□□□ -2.2
USH2AO75445 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC1.33□□□□□ -2.2
USH2AO75445 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
USH2AO75445 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC1.33□□□□□ -2.2
USH2AO75445 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC1.33□□□□□ -2.2
USH2AO75445 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC1.33□□□□□ -2.2
USH2AO75445 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC1.33□□□□□ -2.2
USH2AO75445 AL356292.1-201ENST00000283110 373 ntBASIC1.33□□□□□ -2.2
USH2AO75445 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC1.33□□□□□ -2.2
USH2AO75445 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC1.33□□□□□ -2.2
USH2AO75445 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC1.33□□□□□ -2.2
USH2AO75445 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC1.33□□□□□ -2.2
USH2AO75445 RN7SL594P-201ENST00000470590 287 ntBASIC1.33□□□□□ -2.2
USH2AO75445 AC006445.2-201ENST00000510061 472 ntBASIC1.33□□□□□ -2.2
USH2AO75445 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC1.33□□□□□ -2.2
USH2AO75445 TRAV11-201ENST00000539512 339 ntBASIC1.33□□□□□ -2.2
USH2AO75445 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC1.33□□□□□ -2.2
USH2AO75445 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC1.33□□□□□ -2.2
USH2AO75445 PLCE1P1-201ENST00000622094 305 ntBASIC1.33□□□□□ -2.2
USH2AO75445 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC1.33□□□□□ -2.2
USH2AO75445 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
USH2AO75445 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
USH2AO75445 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
USH2AO75445 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC1.33□□□□□ -2.2
USH2AO75445 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
USH2AO75445 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC1.33□□□□□ -2.2
USH2AO75445 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC1.33□□□□□ -2.2
USH2AO75445 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC1.33□□□□□ -2.2
USH2AO75445 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC1.33□□□□□ -2.2
USH2AO75445 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC1.33□□□□□ -2.2
USH2AO75445 RPS26P47-201ENST00000427219 348 ntBASIC1.33□□□□□ -2.2
USH2AO75445 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC1.33□□□□□ -2.2
USH2AO75445 ELOCP8-201ENST00000439309 332 ntBASIC1.33□□□□□ -2.2
USH2AO75445 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC1.33□□□□□ -2.2
USH2AO75445 ELOCP15-201ENST00000442090 332 ntBASIC1.33□□□□□ -2.2
USH2AO75445 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC1.33□□□□□ -2.2
USH2AO75445 HMGB3P22-202ENST00000451823 572 ntBASIC1.33□□□□□ -2.2
USH2AO75445 AC004057.1-201ENST00000485827 348 ntBASIC1.33□□□□□ -2.2
USH2AO75445 RPS26P15-201ENST00000488067 348 ntBASIC1.33□□□□□ -2.2
USH2AO75445 AP002770.2-201ENST00000543613 532 ntBASIC1.33□□□□□ -2.2
USH2AO75445 AC015871.2-201ENST00000603605 948 ntBASIC1.33□□□□□ -2.2
USH2AO75445 AC007619.2-201ENST00000605743 379 ntBASIC1.33□□□□□ -2.2
USH2AO75445 AC005296.1-201ENST00000616145 209 ntBASIC1.33□□□□□ -2.2
USH2AO75445 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC1.33□□□□□ -2.2
USH2AO75445 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
USH2AO75445 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC1.33□□□□□ -2.2
USH2AO75445 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC1.33□□□□□ -2.2
USH2AO75445 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC1.33□□□□□ -2.2
USH2AO75445 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
USH2AO75445 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC1.33□□□□□ -2.2
USH2AO75445 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC1.33□□□□□ -2.2
USH2AO75445 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC1.33□□□□□ -2.2
USH2AO75445 MIR518C-201ENST00000384822 101 ntBASIC1.33□□□□□ -2.2
USH2AO75445 AL358178.1-201ENST00000407698 397 ntBASIC1.33□□□□□ -2.2
USH2AO75445 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC1.33□□□□□ -2.2
USH2AO75445 SRI-210ENST00000490437 570 ntTSL 2 BASIC1.33□□□□□ -2.2
USH2AO75445 AC114967.1-201ENST00000504890 259 ntBASIC1.33□□□□□ -2.2
USH2AO75445 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC1.33□□□□□ -2.2
USH2AO75445 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC1.33□□□□□ -2.2
USH2AO75445 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC1.33□□□□□ -2.2
USH2AO75445 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC1.33□□□□□ -2.2
USH2AO75445 AC093673.2-201ENST00000609674 331 ntBASIC1.33□□□□□ -2.2
USH2AO75445 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC1.32□□□□□ -2.2
USH2AO75445 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC1.32□□□□□ -2.2
USH2AO75445 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms