Protein–RNA interactions for Protein: O43196

MSH5, MutS protein homolog 5, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5O43196 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC10.3□□□□□ -0.76
MSH5O43196 AC073488.8-201ENST00000631952 757 ntBASIC10.3□□□□□ -0.76
MSH5O43196 NLGN4X-204ENST00000381095 5870 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
MSH5O43196 AC011447.6-201ENST00000623510 2598 ntBASIC10.3□□□□□ -0.76
MSH5O43196 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
MSH5O43196 LINC02203-204ENST00000628444 2323 ntTSL 2 BASIC10.3□□□□□ -0.76
MSH5O43196 AC116667.1-201ENST00000604855 2072 ntBASIC10.3□□□□□ -0.76
MSH5O43196 NLGN4X-201ENST00000275857 5454 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
MSH5O43196 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
MSH5O43196 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC10.3□□□□□ -0.76
MSH5O43196 GARNL3-205ENST00000435213 3599 ntTSL 2 BASIC10.3□□□□□ -0.76
MSH5O43196 NUDT13-202ENST00000357321 2102 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
MSH5O43196 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC10.29□□□□□ -0.76
MSH5O43196 AC015813.3-201ENST00000584805 6113 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
MSH5O43196 SYNPO2-203ENST00000434046 3588 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
MSH5O43196 STX18-AS1-206ENST00000608184 3047 ntTSL 3 BASIC10.29□□□□□ -0.76
MSH5O43196 AC245100.2-201ENST00000454544 1679 ntBASIC10.29□□□□□ -0.76
MSH5O43196 CACNB2-207ENST00000377329 3396 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
MSH5O43196 TMEM209-206ENST00000473456 1961 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
MSH5O43196 RNA5SP141-201ENST00000364543 120 ntBASIC10.29□□□□□ -0.76
MSH5O43196 AL096701.2-201ENST00000416920 238 ntBASIC10.29□□□□□ -0.76
MSH5O43196 AL353621.1-201ENST00000418219 243 ntBASIC10.29□□□□□ -0.76
MSH5O43196 ZEB1-AS1-202ENST00000424191 320 ntTSL 3 BASIC10.29□□□□□ -0.76
MSH5O43196 AC009296.1-201ENST00000443146 155 ntBASIC10.29□□□□□ -0.76
MSH5O43196 AC103996.1-201ENST00000555468 102 ntBASIC10.29□□□□□ -0.76
MSH5O43196 AL109628.1-201ENST00000556877 366 ntBASIC10.29□□□□□ -0.76
MSH5O43196 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC10.29□□□□□ -0.76
MSH5O43196 AC007495.1-202ENST00000565155 559 ntTSL 2 BASIC10.29□□□□□ -0.76
MSH5O43196 AC067852.3-201ENST00000589177 561 ntBASIC10.29□□□□□ -0.76
MSH5O43196 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC10.29□□□□□ -0.76
MSH5O43196 AC004941.1-201ENST00000417506 3120 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
MSH5O43196 SLFN13-209ENST00000533791 4121 ntAPPRIS P1 TSL 2 BASIC10.29□□□□□ -0.76
MSH5O43196 MIER3-205ENST00000409421 2152 ntTSL 2 BASIC10.29□□□□□ -0.76
MSH5O43196 MATR3-232ENST00000502929 4373 ntTSL 2 BASIC10.29□□□□□ -0.76
MSH5O43196 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
MSH5O43196 OR2A1-202ENST00000641044 4632 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
MSH5O43196 ZNF229-204ENST00000614049 4507 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
MSH5O43196 ZCCHC6-204ENST00000375957 2262 ntTSL 2 BASIC10.28□□□□□ -0.76
MSH5O43196 SLC7A2-203ENST00000470360 7638 ntAPPRIS P3 TSL 5 BASIC10.28□□□□□ -0.76
MSH5O43196 NCR3LG1-201ENST00000338965 6438 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
MSH5O43196 CTNND1-230ENST00000532245 5655 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
MSH5O43196 TEAD1-201ENST00000334310 3075 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
MSH5O43196 TEAD1-205ENST00000527575 3063 ntTSL 5 BASIC10.28□□□□□ -0.76
MSH5O43196 PDE6A-205ENST00000617647 4039 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
MSH5O43196 PNN-201ENST00000216832 3576 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
MSH5O43196 TRIM6-202ENST00000380097 3403 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
MSH5O43196 DCP1A-201ENST00000294241 1853 ntTSL 2 BASIC10.28□□□□□ -0.76
MSH5O43196 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
MSH5O43196 FAM13A-201ENST00000264344 5858 ntAPPRIS P2 TSL 5 BASIC10.28□□□□□ -0.76
MSH5O43196 CARD8-217ENST00000520753 3041 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
MSH5O43196 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
MSH5O43196 IGKC-201ENST00000390237 523 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
MSH5O43196 MIR889-201ENST00000401280 79 ntBASIC10.28□□□□□ -0.76
MSH5O43196 AC051619.2-201ENST00000559063 397 ntBASIC10.28□□□□□ -0.76
MSH5O43196 ZNF675-204ENST00000599168 592 ntTSL 2 BASIC10.28□□□□□ -0.76
MSH5O43196 AL391903.3-201ENST00000612158 163 ntBASIC10.28□□□□□ -0.76
MSH5O43196 AL391261.4-201ENST00000616012 481 ntBASIC10.28□□□□□ -0.76
MSH5O43196 ZNF841-201ENST00000389534 3503 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
MSH5O43196 LYRM4-201ENST00000330636 7312 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
MSH5O43196 AC006213.6-201ENST00000623722 4179 ntBASIC10.28□□□□□ -0.76
MSH5O43196 TNS4-201ENST00000254051 4067 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
MSH5O43196 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.76
MSH5O43196 LINC02532-208ENST00000602621 2232 ntTSL 2 BASIC10.27□□□□□ -0.76
MSH5O43196 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
MSH5O43196 ERVFRD-1-201ENST00000472091 3198 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
MSH5O43196 MYO10-201ENST00000274203 11456 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
MSH5O43196 CEP95-201ENST00000553412 2492 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
MSH5O43196 AC002384.1-203ENST00000602761 3049 ntTSL 3 BASIC10.27□□□□□ -0.77
MSH5O43196 SRRM1P3-201ENST00000426911 2678 ntBASIC10.27□□□□□ -0.77
MSH5O43196 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
MSH5O43196 PIWIL2-205ENST00000611073 2864 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
MSH5O43196 LCP1-201ENST00000323076 3787 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
MSH5O43196 FRMPD2-213ENST00000636244 4194 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
MSH5O43196 ENTPD5-201ENST00000334696 5842 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
MSH5O43196 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
MSH5O43196 RNU6-1240P-201ENST00000365155 104 ntBASIC10.27□□□□□ -0.77
MSH5O43196 RNU6-16P-201ENST00000384385 107 ntBASIC10.27□□□□□ -0.77
MSH5O43196 RNU6-15P-201ENST00000384534 107 ntBASIC10.27□□□□□ -0.77
MSH5O43196 MT-TT-201ENST00000387460 66 ntBASIC10.27□□□□□ -0.77
MSH5O43196 AL031848.1-201ENST00000419034 351 ntTSL 5 BASIC10.27□□□□□ -0.77
MSH5O43196 RPS3P2-201ENST00000421346 701 ntBASIC10.27□□□□□ -0.77
MSH5O43196 AL163193.1-201ENST00000444895 788 ntBASIC10.27□□□□□ -0.77
MSH5O43196 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC10.27□□□□□ -0.77
MSH5O43196 CREM-238ENST00000488741 651 ntTSL 2 BASIC10.27□□□□□ -0.77
MSH5O43196 SNORA31.8-201ENST00000516327 108 ntBASIC10.27□□□□□ -0.77
MSH5O43196 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC10.27□□□□□ -0.77
MSH5O43196 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC10.27□□□□□ -0.77
MSH5O43196 AC129492.5-201ENST00000603489 315 ntBASIC10.27□□□□□ -0.77
MSH5O43196 STRADA-246ENST00000640397 1045 ntTSL 5 BASIC10.27□□□□□ -0.77
MSH5O43196 MAPK10-365ENST00000641902 3825 ntBASIC10.27□□□□□ -0.77
MSH5O43196 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
MSH5O43196 C1orf21-201ENST00000235307 10265 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
MSH5O43196 ABCA1-202ENST00000374736 10494 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
MSH5O43196 SNRPD1-201ENST00000300413 4909 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
MSH5O43196 SUPT7L-205ENST00000464789 2664 ntAPPRIS ALT1 TSL 5 BASIC10.27□□□□□ -0.77
MSH5O43196 PIGN-221ENST00000638183 4046 ntTSL 5 BASIC10.27□□□□□ -0.77
MSH5O43196 AL049697.1-201ENST00000507897 2301 ntAPPRIS P1 TSL 2 BASIC10.27□□□□□ -0.77
MSH5O43196 NF1P2-201ENST00000556855 2505 ntBASIC10.27□□□□□ -0.77
MSH5O43196 ABCC5-205ENST00000427120 4697 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
MSH5O43196 NAV2-203ENST00000396085 11000 ntAPPRIS P4 TSL 5 BASIC10.26□□□□□ -0.77
Retrieved 100 of 98,524 protein–RNA pairs in 184.9 ms