Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHGA11Q9Y5H2 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHGA11Q9Y5H2 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.68■□□□□ 0.58
PCDHGA11Q9Y5H2 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHGA11Q9Y5H2 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHGA11Q9Y5H2 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHGA11Q9Y5H2 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
PCDHGA11Q9Y5H2 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCDHGA11Q9Y5H2 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHGA11Q9Y5H2 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
PCDHGA11Q9Y5H2 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
PCDHGA11Q9Y5H2 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
PCDHGA11Q9Y5H2 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHGA11Q9Y5H2 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHGA11Q9Y5H2 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHGA11Q9Y5H2 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHGA11Q9Y5H2 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHGA11Q9Y5H2 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC18.67■□□□□ 0.58
PCDHGA11Q9Y5H2 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC18.67■□□□□ 0.58
PCDHGA11Q9Y5H2 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC18.67■□□□□ 0.58
PCDHGA11Q9Y5H2 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC18.67■□□□□ 0.58
PCDHGA11Q9Y5H2 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC18.67■□□□□ 0.58
PCDHGA11Q9Y5H2 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC18.67■□□□□ 0.58
PCDHGA11Q9Y5H2 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC18.67■□□□□ 0.58
PCDHGA11Q9Y5H2 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHGA11Q9Y5H2 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHGA11Q9Y5H2 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHGA11Q9Y5H2 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHGA11Q9Y5H2 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHGA11Q9Y5H2 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHGA11Q9Y5H2 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHGA11Q9Y5H2 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PCDHGA11Q9Y5H2 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHGA11Q9Y5H2 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHGA11Q9Y5H2 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHGA11Q9Y5H2 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHGA11Q9Y5H2 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
PCDHGA11Q9Y5H2 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
PCDHGA11Q9Y5H2 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHGA11Q9Y5H2 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHGA11Q9Y5H2 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHGA11Q9Y5H2 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC18.66■□□□□ 0.58
PCDHGA11Q9Y5H2 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHGA11Q9Y5H2 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
PCDHGA11Q9Y5H2 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHGA11Q9Y5H2 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC18.66■□□□□ 0.58
PCDHGA11Q9Y5H2 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHGA11Q9Y5H2 RHOD-202ENST00000532559 538 ntTSL 3 BASIC18.66■□□□□ 0.58
PCDHGA11Q9Y5H2 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
PCDHGA11Q9Y5H2 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
PCDHGA11Q9Y5H2 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHGA11Q9Y5H2 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHGA11Q9Y5H2 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHGA11Q9Y5H2 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC18.66■□□□□ 0.58
PCDHGA11Q9Y5H2 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCDHGA11Q9Y5H2 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
PCDHGA11Q9Y5H2 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
PCDHGA11Q9Y5H2 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.66■□□□□ 0.58
PCDHGA11Q9Y5H2 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18.65■□□□□ 0.58
PCDHGA11Q9Y5H2 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHGA11Q9Y5H2 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
PCDHGA11Q9Y5H2 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
PCDHGA11Q9Y5H2 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHGA11Q9Y5H2 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
PCDHGA11Q9Y5H2 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC18.65■□□□□ 0.58
PCDHGA11Q9Y5H2 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC18.65■□□□□ 0.58
PCDHGA11Q9Y5H2 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
PCDHGA11Q9Y5H2 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
PCDHGA11Q9Y5H2 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHGA11Q9Y5H2 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC18.65■□□□□ 0.58
PCDHGA11Q9Y5H2 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHGA11Q9Y5H2 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHGA11Q9Y5H2 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC18.65■□□□□ 0.58
PCDHGA11Q9Y5H2 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC18.65■□□□□ 0.58
PCDHGA11Q9Y5H2 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC18.65■□□□□ 0.58
PCDHGA11Q9Y5H2 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHGA11Q9Y5H2 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHGA11Q9Y5H2 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC18.65■□□□□ 0.58
PCDHGA11Q9Y5H2 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC18.65■□□□□ 0.58
PCDHGA11Q9Y5H2 MMAB-206ENST00000540016 945 ntTSL 3 BASIC18.65■□□□□ 0.58
PCDHGA11Q9Y5H2 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC18.65■□□□□ 0.58
PCDHGA11Q9Y5H2 AC069544.1-201ENST00000609399 999 ntBASIC18.65■□□□□ 0.58
PCDHGA11Q9Y5H2 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHGA11Q9Y5H2 TBCB-214ENST00000629269 413 ntTSL 5 BASIC18.65■□□□□ 0.58
PCDHGA11Q9Y5H2 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHGA11Q9Y5H2 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHGA11Q9Y5H2 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
PCDHGA11Q9Y5H2 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHGA11Q9Y5H2 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PCDHGA11Q9Y5H2 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.65■□□□□ 0.58
PCDHGA11Q9Y5H2 NBPF21P-201ENST00000425093 1451 ntBASIC18.65■□□□□ 0.58
PCDHGA11Q9Y5H2 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
PCDHGA11Q9Y5H2 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.58
PCDHGA11Q9Y5H2 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
PCDHGA11Q9Y5H2 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC18.64■□□□□ 0.57
PCDHGA11Q9Y5H2 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHGA11Q9Y5H2 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PCDHGA11Q9Y5H2 MTDHP1-201ENST00000605323 784 ntBASIC18.64■□□□□ 0.57
PCDHGA11Q9Y5H2 Six3os1_6.1-201ENST00000620790 196 ntBASIC18.64■□□□□ 0.57
PCDHGA11Q9Y5H2 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms