Protein–RNA interactions for Protein: Q9Y223

GNE, Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase, humanhuman

Known RBP Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GNEQ9Y223 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
GNEQ9Y223 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC21.48■■□□□ 1.03
GNEQ9Y223 AC093458.2-201ENST00000623150 629 ntBASIC21.48■■□□□ 1.03
GNEQ9Y223 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
GNEQ9Y223 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
GNEQ9Y223 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
GNEQ9Y223 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
GNEQ9Y223 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC21.48■■□□□ 1.03
GNEQ9Y223 AC104417.2-201ENST00000562989 1793 ntBASIC21.48■■□□□ 1.03
GNEQ9Y223 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
GNEQ9Y223 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
GNEQ9Y223 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
GNEQ9Y223 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
GNEQ9Y223 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
GNEQ9Y223 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
GNEQ9Y223 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC21.47■■□□□ 1.03
GNEQ9Y223 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
GNEQ9Y223 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
GNEQ9Y223 DUSP5P1-201ENST00000441325 1139 ntBASIC21.47■■□□□ 1.03
GNEQ9Y223 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
GNEQ9Y223 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC21.47■■□□□ 1.03
GNEQ9Y223 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC21.47■■□□□ 1.03
GNEQ9Y223 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC21.47■■□□□ 1.03
GNEQ9Y223 WDR88-203ENST00000592765 651 ntTSL 5 BASIC21.47■■□□□ 1.03
GNEQ9Y223 AL121894.2-201ENST00000602977 491 ntBASIC21.47■■□□□ 1.03
GNEQ9Y223 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
GNEQ9Y223 SLC25A24-204ENST00000569674 2357 ntBASIC21.47■■□□□ 1.03
GNEQ9Y223 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
GNEQ9Y223 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC21.47■■□□□ 1.03
GNEQ9Y223 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
GNEQ9Y223 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
GNEQ9Y223 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
GNEQ9Y223 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
GNEQ9Y223 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
GNEQ9Y223 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
GNEQ9Y223 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC21.46■■□□□ 1.03
GNEQ9Y223 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC21.46■■□□□ 1.03
GNEQ9Y223 BUB3-202ENST00000368859 667 ntTSL 3 BASIC21.46■■□□□ 1.03
GNEQ9Y223 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC21.46■■□□□ 1.03
GNEQ9Y223 VENTXP5-201ENST00000523979 775 ntBASIC21.46■■□□□ 1.03
GNEQ9Y223 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC21.46■■□□□ 1.03
GNEQ9Y223 ZNF444P1-201ENST00000559497 298 ntBASIC21.46■■□□□ 1.03
GNEQ9Y223 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC21.46■■□□□ 1.03
GNEQ9Y223 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC21.46■■□□□ 1.03
GNEQ9Y223 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
GNEQ9Y223 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
GNEQ9Y223 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
GNEQ9Y223 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
GNEQ9Y223 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
GNEQ9Y223 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC21.46■■□□□ 1.03
GNEQ9Y223 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
GNEQ9Y223 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
GNEQ9Y223 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.03
GNEQ9Y223 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
GNEQ9Y223 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
GNEQ9Y223 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
GNEQ9Y223 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
GNEQ9Y223 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
GNEQ9Y223 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC21.45■■□□□ 1.02
GNEQ9Y223 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
GNEQ9Y223 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC21.45■■□□□ 1.02
GNEQ9Y223 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC21.45■■□□□ 1.02
GNEQ9Y223 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC21.45■■□□□ 1.02
GNEQ9Y223 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC21.45■■□□□ 1.02
GNEQ9Y223 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC21.45■■□□□ 1.02
GNEQ9Y223 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC21.45■■□□□ 1.02
GNEQ9Y223 GABARAPL3-202ENST00000624044 1851 ntBASIC21.45■■□□□ 1.02
GNEQ9Y223 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC21.45■■□□□ 1.02
GNEQ9Y223 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
GNEQ9Y223 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.44■■□□□ 1.02
GNEQ9Y223 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC21.44■■□□□ 1.02
GNEQ9Y223 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
GNEQ9Y223 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
GNEQ9Y223 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
GNEQ9Y223 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
GNEQ9Y223 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
GNEQ9Y223 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC21.44■■□□□ 1.02
GNEQ9Y223 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
GNEQ9Y223 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
GNEQ9Y223 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
GNEQ9Y223 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
GNEQ9Y223 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC21.44■■□□□ 1.02
GNEQ9Y223 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC21.44■■□□□ 1.02
GNEQ9Y223 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
GNEQ9Y223 FXN-203ENST00000396366 922 ntTSL 2 BASIC21.44■■□□□ 1.02
GNEQ9Y223 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
GNEQ9Y223 SPDYE15P-201ENST00000424157 909 ntBASIC21.44■■□□□ 1.02
GNEQ9Y223 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC21.44■■□□□ 1.02
GNEQ9Y223 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC21.44■■□□□ 1.02
GNEQ9Y223 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
GNEQ9Y223 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC21.44■■□□□ 1.02
GNEQ9Y223 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC21.44■■□□□ 1.02
GNEQ9Y223 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
GNEQ9Y223 AC069148.1-201ENST00000608741 768 ntBASIC21.44■■□□□ 1.02
GNEQ9Y223 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
GNEQ9Y223 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
GNEQ9Y223 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
GNEQ9Y223 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
GNEQ9Y223 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
GNEQ9Y223 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms