Protein–RNA interactions for Protein: Q9UMZ3

PTPRQ, Phosphatidylinositol phosphatase PTPRQ, humanhuman

Predictions only

Length 2,332 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRQQ9UMZ3 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PTPRQQ9UMZ3 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PTPRQQ9UMZ3 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
PTPRQQ9UMZ3 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PTPRQQ9UMZ3 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PTPRQQ9UMZ3 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
PTPRQQ9UMZ3 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PTPRQQ9UMZ3 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PTPRQQ9UMZ3 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
PTPRQQ9UMZ3 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC17.67■□□□□ 0.42
PTPRQQ9UMZ3 NAA38-203ENST00000575071 553 ntTSL 2 BASIC17.67■□□□□ 0.42
PTPRQQ9UMZ3 SPEG-225ENST00000617028 815 ntTSL 5 BASIC17.67■□□□□ 0.42
PTPRQQ9UMZ3 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PTPRQQ9UMZ3 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PTPRQQ9UMZ3 SMG8-203ENST00000578922 2178 ntBASIC17.67■□□□□ 0.42
PTPRQQ9UMZ3 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
PTPRQQ9UMZ3 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PTPRQQ9UMZ3 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PTPRQQ9UMZ3 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
PTPRQQ9UMZ3 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC17.67■□□□□ 0.42
PTPRQQ9UMZ3 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PTPRQQ9UMZ3 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PTPRQQ9UMZ3 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PTPRQQ9UMZ3 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PTPRQQ9UMZ3 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PTPRQQ9UMZ3 LINC00265-3P-201ENST00000447588 903 ntBASIC17.67■□□□□ 0.42
PTPRQQ9UMZ3 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PTPRQQ9UMZ3 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PTPRQQ9UMZ3 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
PTPRQQ9UMZ3 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PTPRQQ9UMZ3 AC022898.2-201ENST00000616822 1312 ntBASIC17.67■□□□□ 0.42
PTPRQQ9UMZ3 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC17.67■□□□□ 0.42
PTPRQQ9UMZ3 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PTPRQQ9UMZ3 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
PTPRQQ9UMZ3 BET1L-206ENST00000486280 665 ntTSL 3 BASIC17.66■□□□□ 0.42
PTPRQQ9UMZ3 REXO1L6P-202ENST00000619970 1078 ntBASIC17.66■□□□□ 0.42
PTPRQQ9UMZ3 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PTPRQQ9UMZ3 AL117328.2-201ENST00000624617 1940 ntBASIC17.66■□□□□ 0.42
PTPRQQ9UMZ3 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC17.66■□□□□ 0.42
PTPRQQ9UMZ3 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PTPRQQ9UMZ3 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PTPRQQ9UMZ3 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PTPRQQ9UMZ3 IL9RP2-201ENST00000423948 1312 ntBASIC17.66■□□□□ 0.42
PTPRQQ9UMZ3 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PTPRQQ9UMZ3 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
PTPRQQ9UMZ3 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC17.66■□□□□ 0.42
PTPRQQ9UMZ3 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PTPRQQ9UMZ3 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PTPRQQ9UMZ3 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC17.66■□□□□ 0.42
PTPRQQ9UMZ3 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PTPRQQ9UMZ3 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PTPRQQ9UMZ3 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.65■□□□□ 0.42
PTPRQQ9UMZ3 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
PTPRQQ9UMZ3 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PTPRQQ9UMZ3 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC17.65■□□□□ 0.42
PTPRQQ9UMZ3 LINC01711-201ENST00000598340 967 ntBASIC17.65■□□□□ 0.42
PTPRQQ9UMZ3 AL353801.3-201ENST00000609898 542 ntBASIC17.65■□□□□ 0.42
PTPRQQ9UMZ3 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC17.65■□□□□ 0.42
PTPRQQ9UMZ3 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PTPRQQ9UMZ3 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PTPRQQ9UMZ3 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC17.65■□□□□ 0.42
PTPRQQ9UMZ3 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PTPRQQ9UMZ3 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PTPRQQ9UMZ3 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PTPRQQ9UMZ3 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC17.65■□□□□ 0.42
PTPRQQ9UMZ3 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
PTPRQQ9UMZ3 PPIE-208ENST00000470213 927 ntTSL 3 BASIC17.65■□□□□ 0.42
PTPRQQ9UMZ3 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PTPRQQ9UMZ3 FOSL1P1-201ENST00000511041 816 ntBASIC17.65■□□□□ 0.42
PTPRQQ9UMZ3 POLD2P1-201ENST00000511220 997 ntBASIC17.65■□□□□ 0.42
PTPRQQ9UMZ3 ABR-204ENST00000543210 1049 ntTSL 2 BASIC17.65■□□□□ 0.42
PTPRQQ9UMZ3 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC17.65■□□□□ 0.42
PTPRQQ9UMZ3 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC17.65■□□□□ 0.42
PTPRQQ9UMZ3 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC17.65■□□□□ 0.42
PTPRQQ9UMZ3 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PTPRQQ9UMZ3 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
PTPRQQ9UMZ3 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PTPRQQ9UMZ3 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PTPRQQ9UMZ3 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
PTPRQQ9UMZ3 FBXW4P1-201ENST00000426721 2239 ntBASIC17.64■□□□□ 0.42
PTPRQQ9UMZ3 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
PTPRQQ9UMZ3 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
PTPRQQ9UMZ3 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
PTPRQQ9UMZ3 AF106564.1-201ENST00000607058 2553 ntBASIC17.64■□□□□ 0.42
PTPRQQ9UMZ3 AL049796.1-201ENST00000565336 1766 ntBASIC17.64■□□□□ 0.41
PTPRQQ9UMZ3 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
PTPRQQ9UMZ3 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PTPRQQ9UMZ3 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC17.64■□□□□ 0.41
PTPRQQ9UMZ3 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PTPRQQ9UMZ3 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PTPRQQ9UMZ3 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC17.64■□□□□ 0.41
PTPRQQ9UMZ3 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC17.64■□□□□ 0.41
PTPRQQ9UMZ3 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC17.64■□□□□ 0.41
PTPRQQ9UMZ3 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC17.64■□□□□ 0.41
PTPRQQ9UMZ3 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC17.64■□□□□ 0.41
PTPRQQ9UMZ3 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC17.64■□□□□ 0.41
PTPRQQ9UMZ3 AC138894.3-201ENST00000603787 634 ntBASIC17.64■□□□□ 0.41
PTPRQQ9UMZ3 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PTPRQQ9UMZ3 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC17.64■□□□□ 0.41
PTPRQQ9UMZ3 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms