Protein–RNA interactions for Protein: Q9UKN5

PRDM4, PR domain zinc finger protein 4, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4Q9UKN5 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PRDM4Q9UKN5 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PRDM4Q9UKN5 RBM38-205ENST00000440234 686 ntTSL 2 BASIC19.88■□□□□ 0.77
PRDM4Q9UKN5 TRIR-202ENST00000588213 841 ntTSL 3 BASIC19.88■□□□□ 0.77
PRDM4Q9UKN5 DOC2GP-204ENST00000639052 2548 ntBASIC19.88■□□□□ 0.77
PRDM4Q9UKN5 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
PRDM4Q9UKN5 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PRDM4Q9UKN5 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
PRDM4Q9UKN5 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
PRDM4Q9UKN5 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
PRDM4Q9UKN5 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PRDM4Q9UKN5 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PRDM4Q9UKN5 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
PRDM4Q9UKN5 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
PRDM4Q9UKN5 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PRDM4Q9UKN5 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
PRDM4Q9UKN5 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC19.87■□□□□ 0.77
PRDM4Q9UKN5 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
PRDM4Q9UKN5 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
PRDM4Q9UKN5 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC19.87■□□□□ 0.77
PRDM4Q9UKN5 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PRDM4Q9UKN5 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
PRDM4Q9UKN5 SERBP1P1-201ENST00000396021 1160 ntBASIC19.87■□□□□ 0.77
PRDM4Q9UKN5 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PRDM4Q9UKN5 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
PRDM4Q9UKN5 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PRDM4Q9UKN5 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC19.87■□□□□ 0.77
PRDM4Q9UKN5 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC19.87■□□□□ 0.77
PRDM4Q9UKN5 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
PRDM4Q9UKN5 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC19.87■□□□□ 0.77
PRDM4Q9UKN5 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC19.87■□□□□ 0.77
PRDM4Q9UKN5 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC19.87■□□□□ 0.77
PRDM4Q9UKN5 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
PRDM4Q9UKN5 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.87■□□□□ 0.77
PRDM4Q9UKN5 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC19.87■□□□□ 0.77
PRDM4Q9UKN5 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
PRDM4Q9UKN5 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
PRDM4Q9UKN5 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
PRDM4Q9UKN5 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PRDM4Q9UKN5 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PRDM4Q9UKN5 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
PRDM4Q9UKN5 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC19.86■□□□□ 0.77
PRDM4Q9UKN5 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC19.86■□□□□ 0.77
PRDM4Q9UKN5 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PRDM4Q9UKN5 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
PRDM4Q9UKN5 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PRDM4Q9UKN5 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC19.86■□□□□ 0.77
PRDM4Q9UKN5 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PRDM4Q9UKN5 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
PRDM4Q9UKN5 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC19.86■□□□□ 0.77
PRDM4Q9UKN5 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PRDM4Q9UKN5 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PRDM4Q9UKN5 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PRDM4Q9UKN5 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PRDM4Q9UKN5 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PRDM4Q9UKN5 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PRDM4Q9UKN5 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
PRDM4Q9UKN5 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
PRDM4Q9UKN5 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
PRDM4Q9UKN5 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
PRDM4Q9UKN5 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PRDM4Q9UKN5 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PRDM4Q9UKN5 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
PRDM4Q9UKN5 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC19.85■□□□□ 0.77
PRDM4Q9UKN5 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PRDM4Q9UKN5 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PRDM4Q9UKN5 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
PRDM4Q9UKN5 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PRDM4Q9UKN5 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PRDM4Q9UKN5 AC079089.2-201ENST00000531211 1277 ntBASIC19.85■□□□□ 0.77
PRDM4Q9UKN5 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC19.85■□□□□ 0.77
PRDM4Q9UKN5 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC19.85■□□□□ 0.77
PRDM4Q9UKN5 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC19.85■□□□□ 0.77
PRDM4Q9UKN5 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC19.85■□□□□ 0.77
PRDM4Q9UKN5 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC19.85■□□□□ 0.77
PRDM4Q9UKN5 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
PRDM4Q9UKN5 GNAS-203ENST00000306120 1878 ntBASIC19.85■□□□□ 0.77
PRDM4Q9UKN5 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC19.85■□□□□ 0.77
PRDM4Q9UKN5 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC19.85■□□□□ 0.77
PRDM4Q9UKN5 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
PRDM4Q9UKN5 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC19.85■□□□□ 0.77
PRDM4Q9UKN5 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
PRDM4Q9UKN5 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
PRDM4Q9UKN5 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC19.85■□□□□ 0.77
PRDM4Q9UKN5 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PRDM4Q9UKN5 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
PRDM4Q9UKN5 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PRDM4Q9UKN5 AL136116.3-201ENST00000402907 1138 ntBASIC19.84■□□□□ 0.77
PRDM4Q9UKN5 AC010141.3-201ENST00000456659 717 ntBASIC19.84■□□□□ 0.77
PRDM4Q9UKN5 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC19.84■□□□□ 0.77
PRDM4Q9UKN5 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC19.84■□□□□ 0.77
PRDM4Q9UKN5 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
PRDM4Q9UKN5 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PRDM4Q9UKN5 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PRDM4Q9UKN5 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC19.84■□□□□ 0.77
PRDM4Q9UKN5 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
PRDM4Q9UKN5 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PRDM4Q9UKN5 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PRDM4Q9UKN5 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
PRDM4Q9UKN5 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms