Protein–RNA interactions for Protein: Q9UGM1

CHRNA9, Neuronal acetylcholine receptor subunit alpha-9, humanhuman

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA9Q9UGM1 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
CHRNA9Q9UGM1 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CHRNA9Q9UGM1 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CHRNA9Q9UGM1 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
CHRNA9Q9UGM1 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CHRNA9Q9UGM1 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CHRNA9Q9UGM1 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC17.58■□□□□ 0.4
CHRNA9Q9UGM1 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC17.57■□□□□ 0.4
CHRNA9Q9UGM1 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHRNA9Q9UGM1 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CHRNA9Q9UGM1 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CHRNA9Q9UGM1 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHRNA9Q9UGM1 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CHRNA9Q9UGM1 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CHRNA9Q9UGM1 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CHRNA9Q9UGM1 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHRNA9Q9UGM1 PRORSD1P-201ENST00000295112 541 ntBASIC17.57■□□□□ 0.4
CHRNA9Q9UGM1 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHRNA9Q9UGM1 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHRNA9Q9UGM1 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CHRNA9Q9UGM1 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC17.57■□□□□ 0.4
CHRNA9Q9UGM1 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CHRNA9Q9UGM1 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
CHRNA9Q9UGM1 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC17.57■□□□□ 0.4
CHRNA9Q9UGM1 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CHRNA9Q9UGM1 C1QL1P1-201ENST00000568105 661 ntBASIC17.57■□□□□ 0.4
CHRNA9Q9UGM1 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC17.57■□□□□ 0.4
CHRNA9Q9UGM1 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC17.57■□□□□ 0.4
CHRNA9Q9UGM1 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC17.57■□□□□ 0.4
CHRNA9Q9UGM1 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC17.57■□□□□ 0.4
CHRNA9Q9UGM1 CABP2-204ENST00000636477 941 ntTSL 5 BASIC17.57■□□□□ 0.4
CHRNA9Q9UGM1 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC17.57■□□□□ 0.4
CHRNA9Q9UGM1 ZNF815P-204ENST00000434898 1737 ntBASIC17.57■□□□□ 0.4
CHRNA9Q9UGM1 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHRNA9Q9UGM1 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHRNA9Q9UGM1 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CHRNA9Q9UGM1 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC17.57■□□□□ 0.4
CHRNA9Q9UGM1 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
CHRNA9Q9UGM1 ANKRD18DP-204ENST00000455355 1975 ntBASIC17.57■□□□□ 0.4
CHRNA9Q9UGM1 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC17.57■□□□□ 0.4
CHRNA9Q9UGM1 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHRNA9Q9UGM1 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CHRNA9Q9UGM1 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC17.56■□□□□ 0.4
CHRNA9Q9UGM1 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CHRNA9Q9UGM1 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CHRNA9Q9UGM1 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CHRNA9Q9UGM1 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
CHRNA9Q9UGM1 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC17.56■□□□□ 0.4
CHRNA9Q9UGM1 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CHRNA9Q9UGM1 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHRNA9Q9UGM1 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC17.56■□□□□ 0.4
CHRNA9Q9UGM1 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
CHRNA9Q9UGM1 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CHRNA9Q9UGM1 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC17.56■□□□□ 0.4
CHRNA9Q9UGM1 FAM197Y4-202ENST00000622692 608 ntBASIC17.56■□□□□ 0.4
CHRNA9Q9UGM1 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHRNA9Q9UGM1 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHRNA9Q9UGM1 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHRNA9Q9UGM1 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CHRNA9Q9UGM1 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CHRNA9Q9UGM1 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CHRNA9Q9UGM1 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CHRNA9Q9UGM1 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
CHRNA9Q9UGM1 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHRNA9Q9UGM1 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC17.55■□□□□ 0.4
CHRNA9Q9UGM1 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CHRNA9Q9UGM1 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CHRNA9Q9UGM1 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC17.55■□□□□ 0.4
CHRNA9Q9UGM1 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHRNA9Q9UGM1 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC17.55■□□□□ 0.4
CHRNA9Q9UGM1 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHRNA9Q9UGM1 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHRNA9Q9UGM1 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC17.55■□□□□ 0.4
CHRNA9Q9UGM1 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
CHRNA9Q9UGM1 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC17.55■□□□□ 0.4
CHRNA9Q9UGM1 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CHRNA9Q9UGM1 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHRNA9Q9UGM1 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHRNA9Q9UGM1 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
CHRNA9Q9UGM1 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC17.55■□□□□ 0.4
CHRNA9Q9UGM1 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC17.55■□□□□ 0.4
CHRNA9Q9UGM1 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CHRNA9Q9UGM1 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
CHRNA9Q9UGM1 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC17.55■□□□□ 0.4
CHRNA9Q9UGM1 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CHRNA9Q9UGM1 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CHRNA9Q9UGM1 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
CHRNA9Q9UGM1 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CHRNA9Q9UGM1 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC17.55■□□□□ 0.4
CHRNA9Q9UGM1 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CHRNA9Q9UGM1 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CHRNA9Q9UGM1 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC17.54■□□□□ 0.4
CHRNA9Q9UGM1 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
CHRNA9Q9UGM1 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CHRNA9Q9UGM1 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CHRNA9Q9UGM1 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC17.54■□□□□ 0.4
CHRNA9Q9UGM1 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CHRNA9Q9UGM1 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CHRNA9Q9UGM1 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
CHRNA9Q9UGM1 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms