Protein–RNA interactions for Protein: Q9NZ94

NLGN3, Neuroligin-3, humanhuman

Predictions only

Length 848 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLGN3Q9NZ94 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NLGN3Q9NZ94 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC18.86■□□□□ 0.61
NLGN3Q9NZ94 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.86■□□□□ 0.61
NLGN3Q9NZ94 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC18.86■□□□□ 0.61
NLGN3Q9NZ94 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
NLGN3Q9NZ94 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
NLGN3Q9NZ94 FAM8A6P-201ENST00000407496 1135 ntBASIC18.86■□□□□ 0.61
NLGN3Q9NZ94 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NLGN3Q9NZ94 GXYLT1P6-201ENST00000456472 1187 ntBASIC18.86■□□□□ 0.61
NLGN3Q9NZ94 CA15P1-201ENST00000481698 905 ntBASIC18.86■□□□□ 0.61
NLGN3Q9NZ94 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC18.86■□□□□ 0.61
NLGN3Q9NZ94 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC18.86■□□□□ 0.61
NLGN3Q9NZ94 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC18.86■□□□□ 0.61
NLGN3Q9NZ94 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC18.86■□□□□ 0.61
NLGN3Q9NZ94 AC139887.4-201ENST00000607877 719 ntBASIC18.86■□□□□ 0.61
NLGN3Q9NZ94 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC18.86■□□□□ 0.61
NLGN3Q9NZ94 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
NLGN3Q9NZ94 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
NLGN3Q9NZ94 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
NLGN3Q9NZ94 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NLGN3Q9NZ94 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NLGN3Q9NZ94 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
NLGN3Q9NZ94 AC020907.5-201ENST00000624372 1936 ntBASIC18.86■□□□□ 0.61
NLGN3Q9NZ94 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC18.86■□□□□ 0.61
NLGN3Q9NZ94 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
NLGN3Q9NZ94 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
NLGN3Q9NZ94 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC18.85■□□□□ 0.61
NLGN3Q9NZ94 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NLGN3Q9NZ94 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC18.85■□□□□ 0.61
NLGN3Q9NZ94 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
NLGN3Q9NZ94 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NLGN3Q9NZ94 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC18.85■□□□□ 0.61
NLGN3Q9NZ94 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
NLGN3Q9NZ94 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NLGN3Q9NZ94 COPE-203ENST00000351079 907 ntTSL 2 BASIC18.85■□□□□ 0.61
NLGN3Q9NZ94 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC18.85■□□□□ 0.61
NLGN3Q9NZ94 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NLGN3Q9NZ94 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC18.85■□□□□ 0.61
NLGN3Q9NZ94 COX11P1-201ENST00000489116 835 ntBASIC18.85■□□□□ 0.61
NLGN3Q9NZ94 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
NLGN3Q9NZ94 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC18.85■□□□□ 0.61
NLGN3Q9NZ94 AL353719.1-201ENST00000566847 864 ntBASIC18.85■□□□□ 0.61
NLGN3Q9NZ94 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
NLGN3Q9NZ94 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NLGN3Q9NZ94 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NLGN3Q9NZ94 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC18.85■□□□□ 0.61
NLGN3Q9NZ94 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
NLGN3Q9NZ94 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.85■□□□□ 0.61
NLGN3Q9NZ94 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
NLGN3Q9NZ94 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NLGN3Q9NZ94 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC18.85■□□□□ 0.61
NLGN3Q9NZ94 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
NLGN3Q9NZ94 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
NLGN3Q9NZ94 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
NLGN3Q9NZ94 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC18.84■□□□□ 0.61
NLGN3Q9NZ94 MED25-212ENST00000618715 1467 ntTSL 5 BASIC18.84■□□□□ 0.61
NLGN3Q9NZ94 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NLGN3Q9NZ94 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC18.84■□□□□ 0.61
NLGN3Q9NZ94 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.84■□□□□ 0.61
NLGN3Q9NZ94 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.84■□□□□ 0.61
NLGN3Q9NZ94 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NLGN3Q9NZ94 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
NLGN3Q9NZ94 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
NLGN3Q9NZ94 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NLGN3Q9NZ94 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC18.84■□□□□ 0.61
NLGN3Q9NZ94 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NLGN3Q9NZ94 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NLGN3Q9NZ94 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC18.84■□□□□ 0.61
NLGN3Q9NZ94 YBX1P2-201ENST00000489612 999 ntBASIC18.84■□□□□ 0.61
NLGN3Q9NZ94 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC18.84■□□□□ 0.61
NLGN3Q9NZ94 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
NLGN3Q9NZ94 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC18.84■□□□□ 0.61
NLGN3Q9NZ94 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC18.84■□□□□ 0.61
NLGN3Q9NZ94 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC18.84■□□□□ 0.61
NLGN3Q9NZ94 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NLGN3Q9NZ94 AC141257.4-201ENST00000634557 245 ntBASIC18.84■□□□□ 0.61
NLGN3Q9NZ94 AC136944.6-201ENST00000634818 245 ntBASIC18.84■□□□□ 0.61
NLGN3Q9NZ94 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
NLGN3Q9NZ94 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.84■□□□□ 0.61
NLGN3Q9NZ94 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.84■□□□□ 0.61
NLGN3Q9NZ94 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NLGN3Q9NZ94 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
NLGN3Q9NZ94 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
NLGN3Q9NZ94 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
NLGN3Q9NZ94 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
NLGN3Q9NZ94 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
NLGN3Q9NZ94 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC18.83■□□□□ 0.61
NLGN3Q9NZ94 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
NLGN3Q9NZ94 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
NLGN3Q9NZ94 TSPY5P-201ENST00000426936 936 ntBASIC18.83■□□□□ 0.6
NLGN3Q9NZ94 SAPCD2P2-201ENST00000431719 1174 ntBASIC18.83■□□□□ 0.6
NLGN3Q9NZ94 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
NLGN3Q9NZ94 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC18.83■□□□□ 0.6
NLGN3Q9NZ94 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
NLGN3Q9NZ94 AC091076.1-201ENST00000610741 619 ntBASIC18.83■□□□□ 0.6
NLGN3Q9NZ94 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC18.83■□□□□ 0.6
NLGN3Q9NZ94 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC18.83■□□□□ 0.6
NLGN3Q9NZ94 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
NLGN3Q9NZ94 MYC-208ENST00000641036 567 ntBASIC18.83■□□□□ 0.6
NLGN3Q9NZ94 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms