Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC19.92■□□□□ 0.78
HPS4Q9NQG7 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC19.92■□□□□ 0.78
HPS4Q9NQG7 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC19.92■□□□□ 0.78
HPS4Q9NQG7 GLRB-205ENST00000512619 728 ntTSL 3 BASIC19.92■□□□□ 0.78
HPS4Q9NQG7 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC19.92■□□□□ 0.78
HPS4Q9NQG7 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
HPS4Q9NQG7 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HPS4Q9NQG7 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
HPS4Q9NQG7 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HPS4Q9NQG7 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
HPS4Q9NQG7 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
HPS4Q9NQG7 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
HPS4Q9NQG7 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC19.91■□□□□ 0.78
HPS4Q9NQG7 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.91■□□□□ 0.78
HPS4Q9NQG7 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
HPS4Q9NQG7 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HPS4Q9NQG7 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
HPS4Q9NQG7 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
HPS4Q9NQG7 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
HPS4Q9NQG7 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC19.91■□□□□ 0.78
HPS4Q9NQG7 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC19.91■□□□□ 0.78
HPS4Q9NQG7 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
HPS4Q9NQG7 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HPS4Q9NQG7 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC19.91■□□□□ 0.78
HPS4Q9NQG7 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC19.91■□□□□ 0.78
HPS4Q9NQG7 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC19.91■□□□□ 0.78
HPS4Q9NQG7 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC19.91■□□□□ 0.78
HPS4Q9NQG7 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC19.91■□□□□ 0.78
HPS4Q9NQG7 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
HPS4Q9NQG7 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
HPS4Q9NQG7 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
HPS4Q9NQG7 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
HPS4Q9NQG7 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
HPS4Q9NQG7 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC19.91■□□□□ 0.78
HPS4Q9NQG7 GOLGA2P11-201ENST00000562660 1621 ntBASIC19.91■□□□□ 0.78
HPS4Q9NQG7 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HPS4Q9NQG7 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HPS4Q9NQG7 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
HPS4Q9NQG7 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC19.9■□□□□ 0.78
HPS4Q9NQG7 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
HPS4Q9NQG7 AC073314.1-201ENST00000568729 2216 ntBASIC19.9■□□□□ 0.78
HPS4Q9NQG7 CD70-202ENST00000423145 881 ntTSL 2 BASIC19.9■□□□□ 0.78
HPS4Q9NQG7 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC19.9■□□□□ 0.78
HPS4Q9NQG7 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HPS4Q9NQG7 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC19.9■□□□□ 0.78
HPS4Q9NQG7 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
HPS4Q9NQG7 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC19.9■□□□□ 0.78
HPS4Q9NQG7 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
HPS4Q9NQG7 GPX4-207ENST00000589115 812 ntTSL 2 BASIC19.9■□□□□ 0.78
HPS4Q9NQG7 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
HPS4Q9NQG7 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HPS4Q9NQG7 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HPS4Q9NQG7 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
HPS4Q9NQG7 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC19.9■□□□□ 0.78
HPS4Q9NQG7 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.9■□□□□ 0.78
HPS4Q9NQG7 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
HPS4Q9NQG7 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
HPS4Q9NQG7 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HPS4Q9NQG7 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.9■□□□□ 0.78
HPS4Q9NQG7 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
HPS4Q9NQG7 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HPS4Q9NQG7 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
HPS4Q9NQG7 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HPS4Q9NQG7 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
HPS4Q9NQG7 FAM8A6P-201ENST00000407496 1135 ntBASIC19.89■□□□□ 0.77
HPS4Q9NQG7 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HPS4Q9NQG7 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
HPS4Q9NQG7 YBX1P2-201ENST00000489612 999 ntBASIC19.89■□□□□ 0.77
HPS4Q9NQG7 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
HPS4Q9NQG7 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC19.89■□□□□ 0.77
HPS4Q9NQG7 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC19.89■□□□□ 0.77
HPS4Q9NQG7 KRT8P41-201ENST00000533985 1514 ntBASIC19.89■□□□□ 0.77
HPS4Q9NQG7 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC19.89■□□□□ 0.77
HPS4Q9NQG7 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
HPS4Q9NQG7 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC19.89■□□□□ 0.77
HPS4Q9NQG7 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC19.89■□□□□ 0.77
HPS4Q9NQG7 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC19.89■□□□□ 0.77
HPS4Q9NQG7 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
HPS4Q9NQG7 MYC-208ENST00000641036 567 ntBASIC19.89■□□□□ 0.77
HPS4Q9NQG7 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HPS4Q9NQG7 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HPS4Q9NQG7 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.88■□□□□ 0.77
HPS4Q9NQG7 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.88■□□□□ 0.77
HPS4Q9NQG7 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC19.88■□□□□ 0.77
HPS4Q9NQG7 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC19.88■□□□□ 0.77
HPS4Q9NQG7 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
HPS4Q9NQG7 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
HPS4Q9NQG7 RNF152P1-201ENST00000397754 604 ntBASIC19.88■□□□□ 0.77
HPS4Q9NQG7 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
HPS4Q9NQG7 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC19.88■□□□□ 0.77
HPS4Q9NQG7 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
HPS4Q9NQG7 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
HPS4Q9NQG7 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC19.88■□□□□ 0.77
HPS4Q9NQG7 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
HPS4Q9NQG7 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC19.88■□□□□ 0.77
HPS4Q9NQG7 TSPY17P-201ENST00000450329 467 ntBASIC19.88■□□□□ 0.77
HPS4Q9NQG7 AL353719.1-201ENST00000566847 864 ntBASIC19.88■□□□□ 0.77
HPS4Q9NQG7 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
HPS4Q9NQG7 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC19.88■□□□□ 0.77
HPS4Q9NQG7 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms