Protein–RNA interactions for Protein: Q9HCC9

ZFYVE28, Lateral signaling target protein 2 homolog, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE28Q9HCC9 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
ZFYVE28Q9HCC9 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
ZFYVE28Q9HCC9 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC22.04■■□□□ 1.12
ZFYVE28Q9HCC9 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC22.04■■□□□ 1.12
ZFYVE28Q9HCC9 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC22.04■■□□□ 1.12
ZFYVE28Q9HCC9 EMBP1-201ENST00000458200 901 ntBASIC22.04■■□□□ 1.12
ZFYVE28Q9HCC9 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC22.04■■□□□ 1.12
ZFYVE28Q9HCC9 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC22.04■■□□□ 1.12
ZFYVE28Q9HCC9 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC22.04■■□□□ 1.12
ZFYVE28Q9HCC9 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC22.04■■□□□ 1.12
ZFYVE28Q9HCC9 TBC1D3P2-202ENST00000577902 1649 ntBASIC22.04■■□□□ 1.12
ZFYVE28Q9HCC9 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC22.04■■□□□ 1.12
ZFYVE28Q9HCC9 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
ZFYVE28Q9HCC9 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC22.04■■□□□ 1.12
ZFYVE28Q9HCC9 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
ZFYVE28Q9HCC9 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC22.03■■□□□ 1.12
ZFYVE28Q9HCC9 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC22.03■■□□□ 1.12
ZFYVE28Q9HCC9 FEM1AP1-201ENST00000431297 1995 ntBASIC22.03■■□□□ 1.12
ZFYVE28Q9HCC9 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC22.03■■□□□ 1.12
ZFYVE28Q9HCC9 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC22.03■■□□□ 1.12
ZFYVE28Q9HCC9 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
ZFYVE28Q9HCC9 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
ZFYVE28Q9HCC9 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC22.03■■□□□ 1.12
ZFYVE28Q9HCC9 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
ZFYVE28Q9HCC9 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC22.03■■□□□ 1.12
ZFYVE28Q9HCC9 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
ZFYVE28Q9HCC9 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC22.03■■□□□ 1.12
ZFYVE28Q9HCC9 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC22.03■■□□□ 1.12
ZFYVE28Q9HCC9 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC22.03■■□□□ 1.12
ZFYVE28Q9HCC9 AL031008.1-201ENST00000619963 541 ntBASIC22.03■■□□□ 1.12
ZFYVE28Q9HCC9 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
ZFYVE28Q9HCC9 AF106564.1-201ENST00000607058 2553 ntBASIC22.03■■□□□ 1.12
ZFYVE28Q9HCC9 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
ZFYVE28Q9HCC9 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC22.02■■□□□ 1.12
ZFYVE28Q9HCC9 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
ZFYVE28Q9HCC9 AL117328.2-201ENST00000624617 1940 ntBASIC22.02■■□□□ 1.12
ZFYVE28Q9HCC9 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC22.02■■□□□ 1.12
ZFYVE28Q9HCC9 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC22.02■■□□□ 1.12
ZFYVE28Q9HCC9 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
ZFYVE28Q9HCC9 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
ZFYVE28Q9HCC9 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
ZFYVE28Q9HCC9 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC22.02■■□□□ 1.12
ZFYVE28Q9HCC9 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
ZFYVE28Q9HCC9 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC22.02■■□□□ 1.12
ZFYVE28Q9HCC9 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
ZFYVE28Q9HCC9 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC22.02■■□□□ 1.12
ZFYVE28Q9HCC9 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC22.02■■□□□ 1.11
ZFYVE28Q9HCC9 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
ZFYVE28Q9HCC9 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
ZFYVE28Q9HCC9 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
ZFYVE28Q9HCC9 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC22.01■■□□□ 1.11
ZFYVE28Q9HCC9 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
ZFYVE28Q9HCC9 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC22.01■■□□□ 1.11
ZFYVE28Q9HCC9 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
ZFYVE28Q9HCC9 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC22.01■■□□□ 1.11
ZFYVE28Q9HCC9 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
ZFYVE28Q9HCC9 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
ZFYVE28Q9HCC9 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
ZFYVE28Q9HCC9 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
ZFYVE28Q9HCC9 TSPY19P-201ENST00000418461 509 ntBASIC22.01■■□□□ 1.11
ZFYVE28Q9HCC9 CHCHD2P8-201ENST00000429873 447 ntBASIC22.01■■□□□ 1.11
ZFYVE28Q9HCC9 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC22.01■■□□□ 1.11
ZFYVE28Q9HCC9 TSPY18P-201ENST00000441642 509 ntBASIC22.01■■□□□ 1.11
ZFYVE28Q9HCC9 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
ZFYVE28Q9HCC9 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC22.01■■□□□ 1.11
ZFYVE28Q9HCC9 AL160237.2-201ENST00000556165 472 ntBASIC22.01■■□□□ 1.11
ZFYVE28Q9HCC9 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC22.01■■□□□ 1.11
ZFYVE28Q9HCC9 AC104692.2-201ENST00000603054 253 ntBASIC22.01■■□□□ 1.11
ZFYVE28Q9HCC9 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC22.01■■□□□ 1.11
ZFYVE28Q9HCC9 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
ZFYVE28Q9HCC9 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
ZFYVE28Q9HCC9 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
ZFYVE28Q9HCC9 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
ZFYVE28Q9HCC9 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
ZFYVE28Q9HCC9 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC22.01■■□□□ 1.11
ZFYVE28Q9HCC9 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC22.01■■□□□ 1.11
ZFYVE28Q9HCC9 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
ZFYVE28Q9HCC9 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC22■■□□□ 1.11
ZFYVE28Q9HCC9 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
ZFYVE28Q9HCC9 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC22■■□□□ 1.11
ZFYVE28Q9HCC9 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
ZFYVE28Q9HCC9 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC22■■□□□ 1.11
ZFYVE28Q9HCC9 GOLGA2P11-201ENST00000562660 1621 ntBASIC22■■□□□ 1.11
ZFYVE28Q9HCC9 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
ZFYVE28Q9HCC9 AP000593.1-201ENST00000393668 712 ntBASIC22■■□□□ 1.11
ZFYVE28Q9HCC9 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC22■■□□□ 1.11
ZFYVE28Q9HCC9 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC22■■□□□ 1.11
ZFYVE28Q9HCC9 LINC01711-201ENST00000598340 967 ntBASIC22■■□□□ 1.11
ZFYVE28Q9HCC9 AC024243.1-201ENST00000609234 778 ntBASIC22■■□□□ 1.11
ZFYVE28Q9HCC9 AL121772.3-201ENST00000610840 674 ntBASIC22■■□□□ 1.11
ZFYVE28Q9HCC9 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC22■■□□□ 1.11
ZFYVE28Q9HCC9 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
ZFYVE28Q9HCC9 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC22■■□□□ 1.11
ZFYVE28Q9HCC9 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC22■■□□□ 1.11
ZFYVE28Q9HCC9 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC22■■□□□ 1.11
ZFYVE28Q9HCC9 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC22■■□□□ 1.11
ZFYVE28Q9HCC9 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
ZFYVE28Q9HCC9 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
ZFYVE28Q9HCC9 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
ZFYVE28Q9HCC9 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC21.99■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms