Protein–RNA interactions for Protein: Q9H422

HIPK3, Homeodomain-interacting protein kinase 3, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3Q9H422 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC21.07■□□□□ 0.96
HIPK3Q9H422 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
HIPK3Q9H422 AC246785.2-201ENST00000432512 513 ntBASIC21.07■□□□□ 0.96
HIPK3Q9H422 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC21.07■□□□□ 0.96
HIPK3Q9H422 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC21.07■□□□□ 0.96
HIPK3Q9H422 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
HIPK3Q9H422 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
HIPK3Q9H422 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC21.07■□□□□ 0.96
HIPK3Q9H422 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC21.07■□□□□ 0.96
HIPK3Q9H422 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
HIPK3Q9H422 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
HIPK3Q9H422 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
HIPK3Q9H422 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
HIPK3Q9H422 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
HIPK3Q9H422 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
HIPK3Q9H422 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
HIPK3Q9H422 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
HIPK3Q9H422 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HIPK3Q9H422 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC21.06■□□□□ 0.96
HIPK3Q9H422 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
HIPK3Q9H422 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HIPK3Q9H422 HBZP1-201ENST00000354915 429 ntBASIC21.06■□□□□ 0.96
HIPK3Q9H422 BUB3-202ENST00000368859 667 ntTSL 3 BASIC21.06■□□□□ 0.96
HIPK3Q9H422 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HIPK3Q9H422 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
HIPK3Q9H422 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC21.06■□□□□ 0.96
HIPK3Q9H422 AL645929.1-201ENST00000420084 975 ntBASIC21.06■□□□□ 0.96
HIPK3Q9H422 SDHD-206ENST00000528182 754 ntTSL 3 BASIC21.06■□□□□ 0.96
HIPK3Q9H422 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC21.06■□□□□ 0.96
HIPK3Q9H422 MIR4674-201ENST00000582457 87 ntBASIC21.06■□□□□ 0.96
HIPK3Q9H422 KLK8-205ENST00000593490 267 ntTSL 3 BASIC21.06■□□□□ 0.96
HIPK3Q9H422 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
HIPK3Q9H422 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HIPK3Q9H422 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HIPK3Q9H422 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
HIPK3Q9H422 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HIPK3Q9H422 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
HIPK3Q9H422 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HIPK3Q9H422 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC21.06■□□□□ 0.96
HIPK3Q9H422 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC21.06■□□□□ 0.96
HIPK3Q9H422 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
HIPK3Q9H422 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC21.05■□□□□ 0.96
HIPK3Q9H422 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HIPK3Q9H422 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC21.05■□□□□ 0.96
HIPK3Q9H422 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
HIPK3Q9H422 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC21.05■□□□□ 0.96
HIPK3Q9H422 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HIPK3Q9H422 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HIPK3Q9H422 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
HIPK3Q9H422 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
HIPK3Q9H422 RN7SL510P-201ENST00000581311 263 ntBASIC21.05■□□□□ 0.96
HIPK3Q9H422 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
HIPK3Q9H422 AC092329.2-201ENST00000598402 547 ntBASIC21.05■□□□□ 0.96
HIPK3Q9H422 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC21.05■□□□□ 0.96
HIPK3Q9H422 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HIPK3Q9H422 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HIPK3Q9H422 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
HIPK3Q9H422 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
HIPK3Q9H422 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC21.05■□□□□ 0.96
HIPK3Q9H422 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
HIPK3Q9H422 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HIPK3Q9H422 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
HIPK3Q9H422 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
HIPK3Q9H422 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC21.04■□□□□ 0.96
HIPK3Q9H422 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC21.04■□□□□ 0.96
HIPK3Q9H422 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC21.04■□□□□ 0.96
HIPK3Q9H422 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC21.04■□□□□ 0.96
HIPK3Q9H422 AL137060.1-201ENST00000618151 2648 ntBASIC21.04■□□□□ 0.96
HIPK3Q9H422 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HIPK3Q9H422 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC21.04■□□□□ 0.96
HIPK3Q9H422 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC21.04■□□□□ 0.96
HIPK3Q9H422 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC21.04■□□□□ 0.96
HIPK3Q9H422 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
HIPK3Q9H422 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HIPK3Q9H422 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
HIPK3Q9H422 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
HIPK3Q9H422 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HIPK3Q9H422 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC21.04■□□□□ 0.96
HIPK3Q9H422 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HIPK3Q9H422 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HIPK3Q9H422 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC21.03■□□□□ 0.96
HIPK3Q9H422 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC21.03■□□□□ 0.96
HIPK3Q9H422 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC21.03■□□□□ 0.96
HIPK3Q9H422 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
HIPK3Q9H422 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
HIPK3Q9H422 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
HIPK3Q9H422 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC21.03■□□□□ 0.96
HIPK3Q9H422 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
HIPK3Q9H422 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC21.03■□□□□ 0.96
HIPK3Q9H422 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC21.03■□□□□ 0.96
HIPK3Q9H422 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
HIPK3Q9H422 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC21.03■□□□□ 0.96
HIPK3Q9H422 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC21.03■□□□□ 0.96
HIPK3Q9H422 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
HIPK3Q9H422 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC21.03■□□□□ 0.96
HIPK3Q9H422 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
HIPK3Q9H422 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
HIPK3Q9H422 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
HIPK3Q9H422 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
HIPK3Q9H422 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms