Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC19.37■□□□□ 0.69
VPS11Q9H270 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC19.37■□□□□ 0.69
VPS11Q9H270 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
VPS11Q9H270 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
VPS11Q9H270 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
VPS11Q9H270 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
VPS11Q9H270 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
VPS11Q9H270 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
VPS11Q9H270 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC19.37■□□□□ 0.69
VPS11Q9H270 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
VPS11Q9H270 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
VPS11Q9H270 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC19.37■□□□□ 0.69
VPS11Q9H270 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
VPS11Q9H270 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
VPS11Q9H270 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
VPS11Q9H270 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
VPS11Q9H270 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC19.37■□□□□ 0.69
VPS11Q9H270 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC19.37■□□□□ 0.69
VPS11Q9H270 BX276092.2-201ENST00000417668 665 ntBASIC19.37■□□□□ 0.69
VPS11Q9H270 AC105036.2-201ENST00000569468 176 ntBASIC19.37■□□□□ 0.69
VPS11Q9H270 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
VPS11Q9H270 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
VPS11Q9H270 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC19.37■□□□□ 0.69
VPS11Q9H270 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
VPS11Q9H270 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
VPS11Q9H270 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
VPS11Q9H270 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
VPS11Q9H270 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC19.36■□□□□ 0.69
VPS11Q9H270 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
VPS11Q9H270 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
VPS11Q9H270 TFP1-202ENST00000475455 1573 ntBASIC19.36■□□□□ 0.69
VPS11Q9H270 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
VPS11Q9H270 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC19.36■□□□□ 0.69
VPS11Q9H270 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
VPS11Q9H270 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
VPS11Q9H270 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
VPS11Q9H270 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC19.36■□□□□ 0.69
VPS11Q9H270 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
VPS11Q9H270 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
VPS11Q9H270 AL390719.1-204ENST00000412397 1219 ntBASIC19.36■□□□□ 0.69
VPS11Q9H270 SERPINH1P1-201ENST00000419794 1249 ntBASIC19.36■□□□□ 0.69
VPS11Q9H270 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC19.36■□□□□ 0.69
VPS11Q9H270 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC19.36■□□□□ 0.69
VPS11Q9H270 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC19.36■□□□□ 0.69
VPS11Q9H270 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
VPS11Q9H270 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
VPS11Q9H270 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
VPS11Q9H270 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC19.36■□□□□ 0.69
VPS11Q9H270 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
VPS11Q9H270 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC19.36■□□□□ 0.69
VPS11Q9H270 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
VPS11Q9H270 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
VPS11Q9H270 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC19.35■□□□□ 0.69
VPS11Q9H270 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
VPS11Q9H270 USP49-202ENST00000373010 2446 ntTSL 5 BASIC19.35■□□□□ 0.69
VPS11Q9H270 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
VPS11Q9H270 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
VPS11Q9H270 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
VPS11Q9H270 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC19.35■□□□□ 0.69
VPS11Q9H270 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC19.35■□□□□ 0.69
VPS11Q9H270 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC19.35■□□□□ 0.69
VPS11Q9H270 AL031598.1-201ENST00000561511 1773 ntBASIC19.35■□□□□ 0.69
VPS11Q9H270 MFF-205ENST00000354503 1085 ntTSL 2 BASIC19.35■□□□□ 0.69
VPS11Q9H270 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC19.35■□□□□ 0.69
VPS11Q9H270 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC19.35■□□□□ 0.69
VPS11Q9H270 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC19.35■□□□□ 0.69
VPS11Q9H270 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC19.35■□□□□ 0.69
VPS11Q9H270 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC19.35■□□□□ 0.69
VPS11Q9H270 AF201337.1-201ENST00000520239 748 ntBASIC19.35■□□□□ 0.69
VPS11Q9H270 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC19.35■□□□□ 0.69
VPS11Q9H270 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
VPS11Q9H270 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC19.35■□□□□ 0.69
VPS11Q9H270 AC080038.1-201ENST00000611274 1154 ntBASIC19.35■□□□□ 0.69
VPS11Q9H270 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
VPS11Q9H270 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
VPS11Q9H270 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
VPS11Q9H270 TEX21P-204ENST00000641479 1693 ntBASIC19.35■□□□□ 0.69
VPS11Q9H270 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
VPS11Q9H270 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
VPS11Q9H270 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC19.35■□□□□ 0.69
VPS11Q9H270 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
VPS11Q9H270 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
VPS11Q9H270 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
VPS11Q9H270 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
VPS11Q9H270 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
VPS11Q9H270 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
VPS11Q9H270 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
VPS11Q9H270 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
VPS11Q9H270 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
VPS11Q9H270 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
VPS11Q9H270 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
VPS11Q9H270 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
VPS11Q9H270 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
VPS11Q9H270 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
VPS11Q9H270 COMP-202ENST00000425807 2292 ntTSL 2 BASIC19.34■□□□□ 0.69
VPS11Q9H270 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
VPS11Q9H270 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC19.34■□□□□ 0.69
VPS11Q9H270 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC19.34■□□□□ 0.69
VPS11Q9H270 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC19.34■□□□□ 0.69
VPS11Q9H270 AC073111.5-205ENST00000641717 521 ntBASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms