Protein–RNA interactions for Protein: Q9GZT3

SLIRP, SRA stem-loop-interacting RNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRPQ9GZT3 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SLIRPQ9GZT3 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
SLIRPQ9GZT3 AC233992.3-201ENST00000607491 485 ntBASIC16.97■□□□□ 0.31
SLIRPQ9GZT3 AL358852.1-201ENST00000623174 1268 ntBASIC16.97■□□□□ 0.31
SLIRPQ9GZT3 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SLIRPQ9GZT3 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SLIRPQ9GZT3 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
SLIRPQ9GZT3 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
SLIRPQ9GZT3 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC16.97■□□□□ 0.31
SLIRPQ9GZT3 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC16.97■□□□□ 0.31
SLIRPQ9GZT3 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC16.97■□□□□ 0.31
SLIRPQ9GZT3 AL645608.8-201ENST00000606034 2086 ntBASIC16.97■□□□□ 0.31
SLIRPQ9GZT3 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SLIRPQ9GZT3 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SLIRPQ9GZT3 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC16.96■□□□□ 0.31
SLIRPQ9GZT3 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SLIRPQ9GZT3 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
SLIRPQ9GZT3 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SLIRPQ9GZT3 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SLIRPQ9GZT3 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
SLIRPQ9GZT3 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC16.96■□□□□ 0.31
SLIRPQ9GZT3 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
SLIRPQ9GZT3 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC16.96■□□□□ 0.31
SLIRPQ9GZT3 KRT87P-202ENST00000534226 1464 ntBASIC16.96■□□□□ 0.31
SLIRPQ9GZT3 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SLIRPQ9GZT3 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
SLIRPQ9GZT3 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC16.96■□□□□ 0.31
SLIRPQ9GZT3 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SLIRPQ9GZT3 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
SLIRPQ9GZT3 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC16.96■□□□□ 0.3
SLIRPQ9GZT3 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC16.96■□□□□ 0.3
SLIRPQ9GZT3 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC16.96■□□□□ 0.3
SLIRPQ9GZT3 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
SLIRPQ9GZT3 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC16.96■□□□□ 0.3
SLIRPQ9GZT3 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
SLIRPQ9GZT3 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SLIRPQ9GZT3 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC16.95■□□□□ 0.3
SLIRPQ9GZT3 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SLIRPQ9GZT3 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.95■□□□□ 0.3
SLIRPQ9GZT3 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SLIRPQ9GZT3 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SLIRPQ9GZT3 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SLIRPQ9GZT3 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC16.95■□□□□ 0.3
SLIRPQ9GZT3 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SLIRPQ9GZT3 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
SLIRPQ9GZT3 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC16.95■□□□□ 0.3
SLIRPQ9GZT3 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC16.95■□□□□ 0.3
SLIRPQ9GZT3 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC16.95■□□□□ 0.3
SLIRPQ9GZT3 GRAMD4P7-201ENST00000578182 1232 ntBASIC16.95■□□□□ 0.3
SLIRPQ9GZT3 AC243732.1-201ENST00000612648 864 ntBASIC16.95■□□□□ 0.3
SLIRPQ9GZT3 FGF8-207ENST00000618991 856 ntTSL 3 BASIC16.95■□□□□ 0.3
SLIRPQ9GZT3 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC16.95■□□□□ 0.3
SLIRPQ9GZT3 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
SLIRPQ9GZT3 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
SLIRPQ9GZT3 ZNF815P-204ENST00000434898 1737 ntBASIC16.95■□□□□ 0.3
SLIRPQ9GZT3 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC16.95■□□□□ 0.3
SLIRPQ9GZT3 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC16.95■□□□□ 0.3
SLIRPQ9GZT3 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
SLIRPQ9GZT3 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SLIRPQ9GZT3 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SLIRPQ9GZT3 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
SLIRPQ9GZT3 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLIRPQ9GZT3 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC16.94■□□□□ 0.3
SLIRPQ9GZT3 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLIRPQ9GZT3 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SLIRPQ9GZT3 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLIRPQ9GZT3 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
SLIRPQ9GZT3 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
SLIRPQ9GZT3 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLIRPQ9GZT3 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLIRPQ9GZT3 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLIRPQ9GZT3 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLIRPQ9GZT3 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
SLIRPQ9GZT3 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLIRPQ9GZT3 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC16.94■□□□□ 0.3
SLIRPQ9GZT3 AC010141.2-201ENST00000452426 721 ntBASIC16.94■□□□□ 0.3
SLIRPQ9GZT3 SLC7A5P2-201ENST00000553010 536 ntBASIC16.94■□□□□ 0.3
SLIRPQ9GZT3 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC16.94■□□□□ 0.3
SLIRPQ9GZT3 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC16.94■□□□□ 0.3
SLIRPQ9GZT3 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC16.94■□□□□ 0.3
SLIRPQ9GZT3 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC16.94■□□□□ 0.3
SLIRPQ9GZT3 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC16.94■□□□□ 0.3
SLIRPQ9GZT3 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLIRPQ9GZT3 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
SLIRPQ9GZT3 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLIRPQ9GZT3 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SLIRPQ9GZT3 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC16.94■□□□□ 0.3
SLIRPQ9GZT3 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SLIRPQ9GZT3 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
SLIRPQ9GZT3 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
SLIRPQ9GZT3 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLIRPQ9GZT3 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SLIRPQ9GZT3 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLIRPQ9GZT3 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SLIRPQ9GZT3 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SLIRPQ9GZT3 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC16.94■□□□□ 0.3
SLIRPQ9GZT3 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
SLIRPQ9GZT3 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SLIRPQ9GZT3 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SLIRPQ9GZT3 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms