Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
LCE3DQ9BYE3 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
LCE3DQ9BYE3 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
LCE3DQ9BYE3 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
LCE3DQ9BYE3 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
LCE3DQ9BYE3 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC5.2□□□□□ -1.58
LCE3DQ9BYE3 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
LCE3DQ9BYE3 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC5.2□□□□□ -1.58
LCE3DQ9BYE3 AP001271.2-201ENST00000624018 1556 ntBASIC5.2□□□□□ -1.58
LCE3DQ9BYE3 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC5.2□□□□□ -1.58
LCE3DQ9BYE3 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC5.2□□□□□ -1.58
LCE3DQ9BYE3 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
LCE3DQ9BYE3 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
LCE3DQ9BYE3 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC5.2□□□□□ -1.58
LCE3DQ9BYE3 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC5.2□□□□□ -1.58
LCE3DQ9BYE3 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
LCE3DQ9BYE3 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
LCE3DQ9BYE3 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
LCE3DQ9BYE3 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC5.2□□□□□ -1.58
LCE3DQ9BYE3 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC5.2□□□□□ -1.58
LCE3DQ9BYE3 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
LCE3DQ9BYE3 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
LCE3DQ9BYE3 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC5.2□□□□□ -1.58
LCE3DQ9BYE3 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC5.2□□□□□ -1.58
LCE3DQ9BYE3 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
LCE3DQ9BYE3 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC5.2□□□□□ -1.58
LCE3DQ9BYE3 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
LCE3DQ9BYE3 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
LCE3DQ9BYE3 USP49-202ENST00000373010 2446 ntTSL 5 BASIC5.19□□□□□ -1.58
LCE3DQ9BYE3 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
LCE3DQ9BYE3 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
LCE3DQ9BYE3 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
LCE3DQ9BYE3 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
LCE3DQ9BYE3 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
LCE3DQ9BYE3 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
LCE3DQ9BYE3 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
LCE3DQ9BYE3 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC5.19□□□□□ -1.58
LCE3DQ9BYE3 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
LCE3DQ9BYE3 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
LCE3DQ9BYE3 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC5.19□□□□□ -1.58
LCE3DQ9BYE3 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
LCE3DQ9BYE3 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
LCE3DQ9BYE3 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC5.19□□□□□ -1.58
LCE3DQ9BYE3 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
LCE3DQ9BYE3 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC5.19□□□□□ -1.58
LCE3DQ9BYE3 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
LCE3DQ9BYE3 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC5.19□□□□□ -1.58
LCE3DQ9BYE3 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
LCE3DQ9BYE3 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC5.19□□□□□ -1.58
LCE3DQ9BYE3 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
LCE3DQ9BYE3 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
LCE3DQ9BYE3 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
LCE3DQ9BYE3 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
LCE3DQ9BYE3 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
LCE3DQ9BYE3 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
LCE3DQ9BYE3 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
LCE3DQ9BYE3 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC5.19□□□□□ -1.58
LCE3DQ9BYE3 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
LCE3DQ9BYE3 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
LCE3DQ9BYE3 SNX3-202ENST00000349379 890 ntTSL 2 BASIC5.19□□□□□ -1.58
LCE3DQ9BYE3 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
LCE3DQ9BYE3 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC5.19□□□□□ -1.58
LCE3DQ9BYE3 PTPA-214ENST00000423100 988 ntTSL 2 BASIC5.19□□□□□ -1.58
LCE3DQ9BYE3 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC5.19□□□□□ -1.58
LCE3DQ9BYE3 UNC93B8-201ENST00000511903 705 ntBASIC5.19□□□□□ -1.58
LCE3DQ9BYE3 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC5.19□□□□□ -1.58
LCE3DQ9BYE3 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC5.19□□□□□ -1.58
LCE3DQ9BYE3 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC5.19□□□□□ -1.58
LCE3DQ9BYE3 AC133561.4-201ENST00000566112 224 ntBASIC5.19□□□□□ -1.58
LCE3DQ9BYE3 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC5.19□□□□□ -1.58
LCE3DQ9BYE3 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
LCE3DQ9BYE3 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
LCE3DQ9BYE3 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
LCE3DQ9BYE3 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
LCE3DQ9BYE3 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
LCE3DQ9BYE3 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
LCE3DQ9BYE3 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
LCE3DQ9BYE3 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC5.19□□□□□ -1.58
LCE3DQ9BYE3 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
LCE3DQ9BYE3 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC5.19□□□□□ -1.58
LCE3DQ9BYE3 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC5.19□□□□□ -1.58
LCE3DQ9BYE3 F11R-206ENST00000621309 4770 ntTSL 5 BASIC5.19□□□□□ -1.58
LCE3DQ9BYE3 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
LCE3DQ9BYE3 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
LCE3DQ9BYE3 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
LCE3DQ9BYE3 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
LCE3DQ9BYE3 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
LCE3DQ9BYE3 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC5.19□□□□□ -1.58
LCE3DQ9BYE3 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
LCE3DQ9BYE3 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
LCE3DQ9BYE3 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
LCE3DQ9BYE3 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
LCE3DQ9BYE3 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
LCE3DQ9BYE3 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC5.19□□□□□ -1.58
LCE3DQ9BYE3 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
LCE3DQ9BYE3 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
LCE3DQ9BYE3 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
LCE3DQ9BYE3 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
LCE3DQ9BYE3 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
LCE3DQ9BYE3 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms