Protein–RNA interactions for Protein: Q9BTX1

NDC1, Nucleoporin NDC1, humanhuman

Predictions only

Length 674 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1Q9BTX1 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
NDC1Q9BTX1 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
NDC1Q9BTX1 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18.4■□□□□ 0.54
NDC1Q9BTX1 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NDC1Q9BTX1 AC112907.3-201ENST00000577781 2400 ntBASIC18.4■□□□□ 0.54
NDC1Q9BTX1 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
NDC1Q9BTX1 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.4■□□□□ 0.54
NDC1Q9BTX1 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
NDC1Q9BTX1 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC18.4■□□□□ 0.54
NDC1Q9BTX1 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
NDC1Q9BTX1 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
NDC1Q9BTX1 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
NDC1Q9BTX1 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC18.39■□□□□ 0.53
NDC1Q9BTX1 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.39■□□□□ 0.53
NDC1Q9BTX1 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC18.39■□□□□ 0.53
NDC1Q9BTX1 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
NDC1Q9BTX1 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
NDC1Q9BTX1 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NDC1Q9BTX1 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC18.39■□□□□ 0.53
NDC1Q9BTX1 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NDC1Q9BTX1 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC18.39■□□□□ 0.53
NDC1Q9BTX1 AL390955.1-201ENST00000428694 934 ntBASIC18.39■□□□□ 0.53
NDC1Q9BTX1 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC18.39■□□□□ 0.53
NDC1Q9BTX1 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
NDC1Q9BTX1 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC18.39■□□□□ 0.53
NDC1Q9BTX1 AC130371.2-201ENST00000619443 611 ntBASIC18.39■□□□□ 0.53
NDC1Q9BTX1 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NDC1Q9BTX1 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NDC1Q9BTX1 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC18.39■□□□□ 0.53
NDC1Q9BTX1 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NDC1Q9BTX1 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NDC1Q9BTX1 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.39■□□□□ 0.53
NDC1Q9BTX1 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NDC1Q9BTX1 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.39■□□□□ 0.53
NDC1Q9BTX1 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NDC1Q9BTX1 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.39■□□□□ 0.53
NDC1Q9BTX1 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC18.39■□□□□ 0.53
NDC1Q9BTX1 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC18.39■□□□□ 0.53
NDC1Q9BTX1 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
NDC1Q9BTX1 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
NDC1Q9BTX1 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
NDC1Q9BTX1 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
NDC1Q9BTX1 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.38■□□□□ 0.53
NDC1Q9BTX1 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NDC1Q9BTX1 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NDC1Q9BTX1 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
NDC1Q9BTX1 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
NDC1Q9BTX1 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
NDC1Q9BTX1 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NDC1Q9BTX1 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
NDC1Q9BTX1 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC18.38■□□□□ 0.53
NDC1Q9BTX1 AC097488.1-201ENST00000507834 756 ntBASIC18.38■□□□□ 0.53
NDC1Q9BTX1 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC18.38■□□□□ 0.53
NDC1Q9BTX1 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC18.38■□□□□ 0.53
NDC1Q9BTX1 NAPSB-206ENST00000562112 1266 ntBASIC18.38■□□□□ 0.53
NDC1Q9BTX1 SLC25A1P4-201ENST00000567977 778 ntBASIC18.38■□□□□ 0.53
NDC1Q9BTX1 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC18.38■□□□□ 0.53
NDC1Q9BTX1 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
NDC1Q9BTX1 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NDC1Q9BTX1 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC18.38■□□□□ 0.53
NDC1Q9BTX1 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
NDC1Q9BTX1 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NDC1Q9BTX1 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NDC1Q9BTX1 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NDC1Q9BTX1 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
NDC1Q9BTX1 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC18.38■□□□□ 0.53
NDC1Q9BTX1 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NDC1Q9BTX1 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NDC1Q9BTX1 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NDC1Q9BTX1 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18.38■□□□□ 0.53
NDC1Q9BTX1 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC18.38■□□□□ 0.53
NDC1Q9BTX1 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.37■□□□□ 0.53
NDC1Q9BTX1 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
NDC1Q9BTX1 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
NDC1Q9BTX1 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
NDC1Q9BTX1 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC18.37■□□□□ 0.53
NDC1Q9BTX1 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.37■□□□□ 0.53
NDC1Q9BTX1 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
NDC1Q9BTX1 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
NDC1Q9BTX1 CRYGFP-201ENST00000418459 633 ntBASIC18.37■□□□□ 0.53
NDC1Q9BTX1 FAM207BP-201ENST00000447172 505 ntBASIC18.37■□□□□ 0.53
NDC1Q9BTX1 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
NDC1Q9BTX1 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC18.37■□□□□ 0.53
NDC1Q9BTX1 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC18.37■□□□□ 0.53
NDC1Q9BTX1 AC097493.4-201ENST00000641197 219 ntBASIC18.37■□□□□ 0.53
NDC1Q9BTX1 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NDC1Q9BTX1 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NDC1Q9BTX1 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC18.37■□□□□ 0.53
NDC1Q9BTX1 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NDC1Q9BTX1 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
NDC1Q9BTX1 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
NDC1Q9BTX1 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
NDC1Q9BTX1 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
NDC1Q9BTX1 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NDC1Q9BTX1 LBX2-AS1-202ENST00000603175 2083 ntBASIC18.37■□□□□ 0.53
NDC1Q9BTX1 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.37■□□□□ 0.53
NDC1Q9BTX1 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
NDC1Q9BTX1 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
NDC1Q9BTX1 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.36■□□□□ 0.53
NDC1Q9BTX1 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms