Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
VRK1Q99986 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
VRK1Q99986 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
VRK1Q99986 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
VRK1Q99986 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC16.98■□□□□ 0.31
VRK1Q99986 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
VRK1Q99986 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC16.98■□□□□ 0.31
VRK1Q99986 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
VRK1Q99986 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
VRK1Q99986 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
VRK1Q99986 TCF3P1-201ENST00000423021 1937 ntBASIC16.98■□□□□ 0.31
VRK1Q99986 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC16.98■□□□□ 0.31
VRK1Q99986 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
VRK1Q99986 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
VRK1Q99986 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC16.97■□□□□ 0.31
VRK1Q99986 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
VRK1Q99986 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC16.97■□□□□ 0.31
VRK1Q99986 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
VRK1Q99986 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
VRK1Q99986 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
VRK1Q99986 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
VRK1Q99986 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
VRK1Q99986 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
VRK1Q99986 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
VRK1Q99986 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
VRK1Q99986 RPS2P55-201ENST00000397318 883 ntBASIC16.97■□□□□ 0.31
VRK1Q99986 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
VRK1Q99986 AC107956.1-201ENST00000494359 873 ntBASIC16.97■□□□□ 0.31
VRK1Q99986 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC16.97■□□□□ 0.31
VRK1Q99986 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
VRK1Q99986 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC16.97■□□□□ 0.31
VRK1Q99986 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC16.97■□□□□ 0.31
VRK1Q99986 AP001412.1-201ENST00000608405 714 ntBASIC16.97■□□□□ 0.31
VRK1Q99986 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
VRK1Q99986 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
VRK1Q99986 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
VRK1Q99986 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
VRK1Q99986 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
VRK1Q99986 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
VRK1Q99986 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
VRK1Q99986 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
VRK1Q99986 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
VRK1Q99986 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
VRK1Q99986 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC16.97■□□□□ 0.31
VRK1Q99986 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC16.97■□□□□ 0.31
VRK1Q99986 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
VRK1Q99986 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC16.96■□□□□ 0.31
VRK1Q99986 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
VRK1Q99986 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
VRK1Q99986 KRT8P17-201ENST00000453110 1448 ntBASIC16.96■□□□□ 0.31
VRK1Q99986 AL135905.2-201ENST00000584934 1404 ntBASIC16.96■□□□□ 0.31
VRK1Q99986 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
VRK1Q99986 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.31
VRK1Q99986 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
VRK1Q99986 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
VRK1Q99986 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
VRK1Q99986 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
VRK1Q99986 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
VRK1Q99986 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
VRK1Q99986 MDFI-202ENST00000373050 809 ntTSL 2 BASIC16.96■□□□□ 0.31
VRK1Q99986 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
VRK1Q99986 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
VRK1Q99986 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
VRK1Q99986 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC16.96■□□□□ 0.31
VRK1Q99986 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
VRK1Q99986 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC16.96■□□□□ 0.31
VRK1Q99986 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
VRK1Q99986 MAX-217ENST00000557277 728 ntTSL 3 BASIC16.96■□□□□ 0.31
VRK1Q99986 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
VRK1Q99986 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC16.96■□□□□ 0.31
VRK1Q99986 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC16.96■□□□□ 0.31
VRK1Q99986 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
VRK1Q99986 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
VRK1Q99986 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC16.96■□□□□ 0.31
VRK1Q99986 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
VRK1Q99986 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
VRK1Q99986 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
VRK1Q99986 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC16.96■□□□□ 0.3
VRK1Q99986 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
VRK1Q99986 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC16.96■□□□□ 0.3
VRK1Q99986 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
VRK1Q99986 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
VRK1Q99986 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
VRK1Q99986 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC16.95■□□□□ 0.3
VRK1Q99986 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
VRK1Q99986 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
VRK1Q99986 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
VRK1Q99986 AC092720.2-201ENST00000602388 1665 ntBASIC16.95■□□□□ 0.3
VRK1Q99986 NBPF21P-201ENST00000425093 1451 ntBASIC16.95■□□□□ 0.3
VRK1Q99986 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
VRK1Q99986 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
VRK1Q99986 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
VRK1Q99986 AC012618.2-201ENST00000428058 849 ntBASIC16.95■□□□□ 0.3
VRK1Q99986 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC16.95■□□□□ 0.3
VRK1Q99986 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC16.95■□□□□ 0.3
VRK1Q99986 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
VRK1Q99986 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
VRK1Q99986 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
VRK1Q99986 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
VRK1Q99986 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms