Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC16.23■□□□□ 0.19
FOXC2Q99958 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
FOXC2Q99958 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
FOXC2Q99958 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC16.23■□□□□ 0.19
FOXC2Q99958 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
FOXC2Q99958 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
FOXC2Q99958 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
FOXC2Q99958 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
FOXC2Q99958 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
FOXC2Q99958 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
FOXC2Q99958 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
FOXC2Q99958 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
FOXC2Q99958 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
FOXC2Q99958 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC16.22■□□□□ 0.19
FOXC2Q99958 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
FOXC2Q99958 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
FOXC2Q99958 PPIH-202ENST00000372549 327 ntTSL 3 BASIC16.22■□□□□ 0.19
FOXC2Q99958 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC16.22■□□□□ 0.19
FOXC2Q99958 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
FOXC2Q99958 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC16.22■□□□□ 0.19
FOXC2Q99958 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC16.22■□□□□ 0.19
FOXC2Q99958 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC16.22■□□□□ 0.19
FOXC2Q99958 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC16.22■□□□□ 0.19
FOXC2Q99958 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC16.22■□□□□ 0.19
FOXC2Q99958 TBCB-205ENST00000585746 875 ntTSL 3 BASIC16.22■□□□□ 0.19
FOXC2Q99958 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
FOXC2Q99958 IFNL4P1-201ENST00000607083 540 ntBASIC16.22■□□□□ 0.19
FOXC2Q99958 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC16.22■□□□□ 0.19
FOXC2Q99958 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
FOXC2Q99958 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
FOXC2Q99958 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
FOXC2Q99958 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC16.22■□□□□ 0.19
FOXC2Q99958 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
FOXC2Q99958 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
FOXC2Q99958 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC16.21■□□□□ 0.19
FOXC2Q99958 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
FOXC2Q99958 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
FOXC2Q99958 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
FOXC2Q99958 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
FOXC2Q99958 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
FOXC2Q99958 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
FOXC2Q99958 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
FOXC2Q99958 TMEM179-206ENST00000616017 1645 ntBASIC16.21■□□□□ 0.19
FOXC2Q99958 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC16.21■□□□□ 0.19
FOXC2Q99958 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC16.21■□□□□ 0.19
FOXC2Q99958 AC009078.2-202ENST00000463353 338 ntBASIC16.21■□□□□ 0.19
FOXC2Q99958 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC16.21■□□□□ 0.19
FOXC2Q99958 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC16.21■□□□□ 0.19
FOXC2Q99958 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
FOXC2Q99958 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC16.21■□□□□ 0.19
FOXC2Q99958 MIR3180-1-201ENST00000580374 94 ntBASIC16.21■□□□□ 0.19
FOXC2Q99958 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC16.21■□□□□ 0.19
FOXC2Q99958 MIR3180-3-201ENST00000584616 94 ntBASIC16.21■□□□□ 0.19
FOXC2Q99958 AC011498.5-201ENST00000592027 486 ntBASIC16.21■□□□□ 0.19
FOXC2Q99958 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
FOXC2Q99958 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC16.21■□□□□ 0.19
FOXC2Q99958 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC16.21■□□□□ 0.19
FOXC2Q99958 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
FOXC2Q99958 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC16.21■□□□□ 0.19
FOXC2Q99958 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC16.21■□□□□ 0.19
FOXC2Q99958 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
FOXC2Q99958 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
FOXC2Q99958 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC16.21■□□□□ 0.18
FOXC2Q99958 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
FOXC2Q99958 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
FOXC2Q99958 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
FOXC2Q99958 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC16.2■□□□□ 0.18
FOXC2Q99958 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
FOXC2Q99958 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
FOXC2Q99958 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
FOXC2Q99958 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
FOXC2Q99958 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC16.2■□□□□ 0.18
FOXC2Q99958 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
FOXC2Q99958 GAD2-202ENST00000376248 680 ntTSL 5 BASIC16.2■□□□□ 0.18
FOXC2Q99958 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC16.2■□□□□ 0.18
FOXC2Q99958 NME1-207ENST00000480143 964 ntTSL 2 BASIC16.2■□□□□ 0.18
FOXC2Q99958 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC16.2■□□□□ 0.18
FOXC2Q99958 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC16.2■□□□□ 0.18
FOXC2Q99958 AL160237.2-201ENST00000556165 472 ntBASIC16.2■□□□□ 0.18
FOXC2Q99958 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC16.2■□□□□ 0.18
FOXC2Q99958 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC16.2■□□□□ 0.18
FOXC2Q99958 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
FOXC2Q99958 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
FOXC2Q99958 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC16.2■□□□□ 0.18
FOXC2Q99958 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
FOXC2Q99958 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
FOXC2Q99958 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
FOXC2Q99958 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC16.19■□□□□ 0.18
FOXC2Q99958 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
FOXC2Q99958 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
FOXC2Q99958 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
FOXC2Q99958 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC16.19■□□□□ 0.18
FOXC2Q99958 DPP3P2-201ENST00000416030 1696 ntBASIC16.19■□□□□ 0.18
FOXC2Q99958 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
FOXC2Q99958 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
FOXC2Q99958 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
FOXC2Q99958 AC016734.2-201ENST00000624325 1377 ntBASIC16.19■□□□□ 0.18
FOXC2Q99958 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
FOXC2Q99958 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
FOXC2Q99958 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms