Protein–RNA interactions for Protein: Q96PB1

CASD1, N-acetylneuraminate 9-O-acetyltransferase, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASD1Q96PB1 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CASD1Q96PB1 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CASD1Q96PB1 ZNF815P-204ENST00000434898 1737 ntBASIC20.58■□□□□ 0.89
CASD1Q96PB1 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
CASD1Q96PB1 AC112907.2-201ENST00000448639 330 ntBASIC20.58■□□□□ 0.89
CASD1Q96PB1 PTK2-216ENST00000519881 863 ntTSL 3 BASIC20.58■□□□□ 0.89
CASD1Q96PB1 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC20.58■□□□□ 0.89
CASD1Q96PB1 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC20.58■□□□□ 0.89
CASD1Q96PB1 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC20.58■□□□□ 0.89
CASD1Q96PB1 HYMAI.1-201ENST00000620949 238 ntBASIC20.58■□□□□ 0.89
CASD1Q96PB1 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CASD1Q96PB1 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CASD1Q96PB1 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC20.58■□□□□ 0.88
CASD1Q96PB1 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CASD1Q96PB1 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CASD1Q96PB1 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CASD1Q96PB1 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CASD1Q96PB1 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CASD1Q96PB1 TCF3P1-201ENST00000423021 1937 ntBASIC20.57■□□□□ 0.88
CASD1Q96PB1 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CASD1Q96PB1 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC20.57■□□□□ 0.88
CASD1Q96PB1 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
CASD1Q96PB1 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CASD1Q96PB1 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.57■□□□□ 0.88
CASD1Q96PB1 STARP1-201ENST00000397973 869 ntBASIC20.57■□□□□ 0.88
CASD1Q96PB1 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CASD1Q96PB1 TSPY23P-201ENST00000440136 739 ntBASIC20.57■□□□□ 0.88
CASD1Q96PB1 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CASD1Q96PB1 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC20.57■□□□□ 0.88
CASD1Q96PB1 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC20.57■□□□□ 0.88
CASD1Q96PB1 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC20.57■□□□□ 0.88
CASD1Q96PB1 TOLLIP-AS1-201ENST00000530897 939 ntBASIC20.57■□□□□ 0.88
CASD1Q96PB1 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC20.57■□□□□ 0.88
CASD1Q96PB1 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CASD1Q96PB1 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC20.57■□□□□ 0.88
CASD1Q96PB1 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC20.57■□□□□ 0.88
CASD1Q96PB1 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC20.57■□□□□ 0.88
CASD1Q96PB1 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CASD1Q96PB1 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC20.57■□□□□ 0.88
CASD1Q96PB1 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
CASD1Q96PB1 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.56■□□□□ 0.88
CASD1Q96PB1 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.56■□□□□ 0.88
CASD1Q96PB1 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC20.56■□□□□ 0.88
CASD1Q96PB1 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC20.56■□□□□ 0.88
CASD1Q96PB1 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CASD1Q96PB1 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CASD1Q96PB1 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC20.56■□□□□ 0.88
CASD1Q96PB1 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
CASD1Q96PB1 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
CASD1Q96PB1 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CASD1Q96PB1 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CASD1Q96PB1 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CASD1Q96PB1 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC20.56■□□□□ 0.88
CASD1Q96PB1 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC20.56■□□□□ 0.88
CASD1Q96PB1 AL136038.3-201ENST00000561909 1096 ntBASIC20.56■□□□□ 0.88
CASD1Q96PB1 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC20.56■□□□□ 0.88
CASD1Q96PB1 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC20.56■□□□□ 0.88
CASD1Q96PB1 AC083849.1-201ENST00000615227 514 ntBASIC20.56■□□□□ 0.88
CASD1Q96PB1 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC20.56■□□□□ 0.88
CASD1Q96PB1 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CASD1Q96PB1 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CASD1Q96PB1 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CASD1Q96PB1 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CASD1Q96PB1 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CASD1Q96PB1 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CASD1Q96PB1 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CASD1Q96PB1 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CASD1Q96PB1 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC20.55■□□□□ 0.88
CASD1Q96PB1 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
CASD1Q96PB1 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CASD1Q96PB1 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CASD1Q96PB1 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC20.55■□□□□ 0.88
CASD1Q96PB1 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CASD1Q96PB1 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC20.55■□□□□ 0.88
CASD1Q96PB1 LY6E-213ENST00000522528 606 ntTSL 3 BASIC20.55■□□□□ 0.88
CASD1Q96PB1 CD81-212ENST00000526072 1172 ntTSL 5 BASIC20.55■□□□□ 0.88
CASD1Q96PB1 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC20.55■□□□□ 0.88
CASD1Q96PB1 CR769767.2-201ENST00000622735 460 ntBASIC20.55■□□□□ 0.88
CASD1Q96PB1 AC093458.2-201ENST00000623150 629 ntBASIC20.55■□□□□ 0.88
CASD1Q96PB1 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC20.55■□□□□ 0.88
CASD1Q96PB1 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CASD1Q96PB1 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
CASD1Q96PB1 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CASD1Q96PB1 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC20.55■□□□□ 0.88
CASD1Q96PB1 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
CASD1Q96PB1 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CASD1Q96PB1 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CASD1Q96PB1 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CASD1Q96PB1 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC20.54■□□□□ 0.88
CASD1Q96PB1 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CASD1Q96PB1 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC20.54■□□□□ 0.88
CASD1Q96PB1 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CASD1Q96PB1 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
CASD1Q96PB1 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CASD1Q96PB1 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CASD1Q96PB1 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CASD1Q96PB1 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC20.54■□□□□ 0.88
CASD1Q96PB1 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC20.54■□□□□ 0.88
CASD1Q96PB1 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC20.54■□□□□ 0.88
CASD1Q96PB1 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms