Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
ECHDC3Q96DC8 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
ECHDC3Q96DC8 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
ECHDC3Q96DC8 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ECHDC3Q96DC8 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ECHDC3Q96DC8 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC19.3■□□□□ 0.68
ECHDC3Q96DC8 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ECHDC3Q96DC8 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ECHDC3Q96DC8 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ECHDC3Q96DC8 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
ECHDC3Q96DC8 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
ECHDC3Q96DC8 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ECHDC3Q96DC8 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ECHDC3Q96DC8 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
ECHDC3Q96DC8 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ECHDC3Q96DC8 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ECHDC3Q96DC8 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC19.29■□□□□ 0.68
ECHDC3Q96DC8 KRT8P11-201ENST00000409686 1436 ntBASIC19.29■□□□□ 0.68
ECHDC3Q96DC8 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
ECHDC3Q96DC8 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ECHDC3Q96DC8 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
ECHDC3Q96DC8 PRR31-201ENST00000371629 978 ntTSL 2 BASIC19.29■□□□□ 0.68
ECHDC3Q96DC8 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC19.29■□□□□ 0.68
ECHDC3Q96DC8 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC19.29■□□□□ 0.68
ECHDC3Q96DC8 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC19.29■□□□□ 0.68
ECHDC3Q96DC8 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
ECHDC3Q96DC8 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC19.29■□□□□ 0.68
ECHDC3Q96DC8 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
ECHDC3Q96DC8 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
ECHDC3Q96DC8 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC19.29■□□□□ 0.68
ECHDC3Q96DC8 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC19.29■□□□□ 0.68
ECHDC3Q96DC8 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ECHDC3Q96DC8 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC19.29■□□□□ 0.68
ECHDC3Q96DC8 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ECHDC3Q96DC8 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.29■□□□□ 0.68
ECHDC3Q96DC8 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
ECHDC3Q96DC8 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
ECHDC3Q96DC8 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
ECHDC3Q96DC8 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ECHDC3Q96DC8 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
ECHDC3Q96DC8 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC19.28■□□□□ 0.68
ECHDC3Q96DC8 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ECHDC3Q96DC8 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.28■□□□□ 0.68
ECHDC3Q96DC8 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ECHDC3Q96DC8 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC19.28■□□□□ 0.68
ECHDC3Q96DC8 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.28■□□□□ 0.68
ECHDC3Q96DC8 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
ECHDC3Q96DC8 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ECHDC3Q96DC8 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ECHDC3Q96DC8 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ECHDC3Q96DC8 TSPY21P-201ENST00000433481 731 ntBASIC19.28■□□□□ 0.68
ECHDC3Q96DC8 FDX2-206ENST00000492239 773 ntTSL 2 BASIC19.28■□□□□ 0.68
ECHDC3Q96DC8 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC19.28■□□□□ 0.68
ECHDC3Q96DC8 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC19.28■□□□□ 0.68
ECHDC3Q96DC8 PRSS44-201ENST00000515154 1146 ntBASIC19.28■□□□□ 0.68
ECHDC3Q96DC8 CKBP1-201ENST00000565489 1086 ntBASIC19.28■□□□□ 0.68
ECHDC3Q96DC8 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC19.28■□□□□ 0.68
ECHDC3Q96DC8 SLC25A1P4-201ENST00000567977 778 ntBASIC19.28■□□□□ 0.68
ECHDC3Q96DC8 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC19.28■□□□□ 0.68
ECHDC3Q96DC8 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
ECHDC3Q96DC8 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ECHDC3Q96DC8 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC19.27■□□□□ 0.68
ECHDC3Q96DC8 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ECHDC3Q96DC8 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC19.27■□□□□ 0.68
ECHDC3Q96DC8 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
ECHDC3Q96DC8 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ECHDC3Q96DC8 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.27■□□□□ 0.68
ECHDC3Q96DC8 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC19.27■□□□□ 0.68
ECHDC3Q96DC8 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC19.27■□□□□ 0.68
ECHDC3Q96DC8 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
ECHDC3Q96DC8 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.27■□□□□ 0.68
ECHDC3Q96DC8 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ECHDC3Q96DC8 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC19.27■□□□□ 0.68
ECHDC3Q96DC8 CRYGFP-201ENST00000418459 633 ntBASIC19.27■□□□□ 0.68
ECHDC3Q96DC8 TSPY23P-201ENST00000440136 739 ntBASIC19.27■□□□□ 0.68
ECHDC3Q96DC8 MFAP1P1-201ENST00000442257 1255 ntBASIC19.27■□□□□ 0.68
ECHDC3Q96DC8 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
ECHDC3Q96DC8 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC19.27■□□□□ 0.68
ECHDC3Q96DC8 AC012306.2-201ENST00000609350 630 ntBASIC19.27■□□□□ 0.68
ECHDC3Q96DC8 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC19.27■□□□□ 0.68
ECHDC3Q96DC8 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC19.27■□□□□ 0.68
ECHDC3Q96DC8 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
ECHDC3Q96DC8 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
ECHDC3Q96DC8 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
ECHDC3Q96DC8 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
ECHDC3Q96DC8 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
ECHDC3Q96DC8 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.67
ECHDC3Q96DC8 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
ECHDC3Q96DC8 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.27■□□□□ 0.67
ECHDC3Q96DC8 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
ECHDC3Q96DC8 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ECHDC3Q96DC8 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
ECHDC3Q96DC8 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ECHDC3Q96DC8 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.26■□□□□ 0.67
ECHDC3Q96DC8 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ECHDC3Q96DC8 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
ECHDC3Q96DC8 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.26■□□□□ 0.67
ECHDC3Q96DC8 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC19.26■□□□□ 0.67
ECHDC3Q96DC8 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.26■□□□□ 0.67
ECHDC3Q96DC8 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms