Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
APH1AQ96BI3 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
APH1AQ96BI3 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.32
APH1AQ96BI3 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
APH1AQ96BI3 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
APH1AQ96BI3 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
APH1AQ96BI3 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
APH1AQ96BI3 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
APH1AQ96BI3 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
APH1AQ96BI3 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC17.08■□□□□ 0.32
APH1AQ96BI3 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
APH1AQ96BI3 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
APH1AQ96BI3 MIR6786-201ENST00000616843 113 ntBASIC17.08■□□□□ 0.32
APH1AQ96BI3 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
APH1AQ96BI3 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC17.08■□□□□ 0.32
APH1AQ96BI3 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
APH1AQ96BI3 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.07■□□□□ 0.32
APH1AQ96BI3 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
APH1AQ96BI3 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
APH1AQ96BI3 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
APH1AQ96BI3 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
APH1AQ96BI3 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
APH1AQ96BI3 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
APH1AQ96BI3 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
APH1AQ96BI3 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
APH1AQ96BI3 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
APH1AQ96BI3 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
APH1AQ96BI3 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
APH1AQ96BI3 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
APH1AQ96BI3 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC17.07■□□□□ 0.32
APH1AQ96BI3 AC116562.2-201ENST00000507042 360 ntBASIC17.07■□□□□ 0.32
APH1AQ96BI3 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC17.07■□□□□ 0.32
APH1AQ96BI3 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC17.07■□□□□ 0.32
APH1AQ96BI3 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
APH1AQ96BI3 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC17.07■□□□□ 0.32
APH1AQ96BI3 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC17.07■□□□□ 0.32
APH1AQ96BI3 REXO1L10P-201ENST00000615707 1290 ntBASIC17.07■□□□□ 0.32
APH1AQ96BI3 REXO1L12P-201ENST00000622156 912 ntBASIC17.07■□□□□ 0.32
APH1AQ96BI3 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
APH1AQ96BI3 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
APH1AQ96BI3 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC17.07■□□□□ 0.32
APH1AQ96BI3 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
APH1AQ96BI3 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
APH1AQ96BI3 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
APH1AQ96BI3 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
APH1AQ96BI3 AC104417.2-201ENST00000562989 1793 ntBASIC17.07■□□□□ 0.32
APH1AQ96BI3 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.07■□□□□ 0.32
APH1AQ96BI3 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
APH1AQ96BI3 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
APH1AQ96BI3 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
APH1AQ96BI3 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
APH1AQ96BI3 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
APH1AQ96BI3 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
APH1AQ96BI3 RCC2P6-201ENST00000526625 1557 ntBASIC17.06■□□□□ 0.32
APH1AQ96BI3 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
APH1AQ96BI3 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
APH1AQ96BI3 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
APH1AQ96BI3 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
APH1AQ96BI3 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
APH1AQ96BI3 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
APH1AQ96BI3 AC004951.3-201ENST00000418645 1148 ntBASIC17.06■□□□□ 0.32
APH1AQ96BI3 B3GAT3P1-201ENST00000471720 806 ntBASIC17.06■□□□□ 0.32
APH1AQ96BI3 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC17.06■□□□□ 0.32
APH1AQ96BI3 Z85996.1-201ENST00000494644 937 ntBASIC17.06■□□□□ 0.32
APH1AQ96BI3 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC17.06■□□□□ 0.32
APH1AQ96BI3 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
APH1AQ96BI3 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC17.06■□□□□ 0.32
APH1AQ96BI3 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC17.06■□□□□ 0.32
APH1AQ96BI3 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC17.06■□□□□ 0.32
APH1AQ96BI3 AC011298.2-201ENST00000617989 482 ntBASIC17.06■□□□□ 0.32
APH1AQ96BI3 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC17.06■□□□□ 0.32
APH1AQ96BI3 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
APH1AQ96BI3 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
APH1AQ96BI3 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
APH1AQ96BI3 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
APH1AQ96BI3 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
APH1AQ96BI3 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
APH1AQ96BI3 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC17.06■□□□□ 0.32
APH1AQ96BI3 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
APH1AQ96BI3 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
APH1AQ96BI3 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
APH1AQ96BI3 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
APH1AQ96BI3 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC17.05■□□□□ 0.32
APH1AQ96BI3 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
APH1AQ96BI3 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
APH1AQ96BI3 AL158211.5-201ENST00000623583 2518 ntBASIC17.05■□□□□ 0.32
APH1AQ96BI3 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC17.05■□□□□ 0.32
APH1AQ96BI3 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
APH1AQ96BI3 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
APH1AQ96BI3 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
APH1AQ96BI3 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
APH1AQ96BI3 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC17.05■□□□□ 0.32
APH1AQ96BI3 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC17.05■□□□□ 0.32
APH1AQ96BI3 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
APH1AQ96BI3 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC17.05■□□□□ 0.32
APH1AQ96BI3 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
APH1AQ96BI3 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
APH1AQ96BI3 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC17.05■□□□□ 0.32
APH1AQ96BI3 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
APH1AQ96BI3 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms