Protein–RNA interactions for Protein: Q96BH1

RNF25, E3 ubiquitin-protein ligase RNF25, humanhuman

Predicted RBP Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF25Q96BH1 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RNF25Q96BH1 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
RNF25Q96BH1 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC20.23■□□□□ 0.83
RNF25Q96BH1 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RNF25Q96BH1 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RNF25Q96BH1 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RNF25Q96BH1 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC20.23■□□□□ 0.83
RNF25Q96BH1 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC20.23■□□□□ 0.83
RNF25Q96BH1 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
RNF25Q96BH1 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RNF25Q96BH1 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
RNF25Q96BH1 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RNF25Q96BH1 TEX21P-204ENST00000641479 1693 ntBASIC20.22■□□□□ 0.83
RNF25Q96BH1 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RNF25Q96BH1 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC20.22■□□□□ 0.83
RNF25Q96BH1 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC20.22■□□□□ 0.83
RNF25Q96BH1 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
RNF25Q96BH1 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RNF25Q96BH1 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RNF25Q96BH1 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RNF25Q96BH1 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
RNF25Q96BH1 AL845331.1-201ENST00000424978 1190 ntBASIC20.22■□□□□ 0.83
RNF25Q96BH1 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC20.22■□□□□ 0.83
RNF25Q96BH1 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC20.22■□□□□ 0.83
RNF25Q96BH1 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RNF25Q96BH1 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC20.22■□□□□ 0.83
RNF25Q96BH1 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
RNF25Q96BH1 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC20.22■□□□□ 0.83
RNF25Q96BH1 KLF2-202ENST00000592003 564 ntTSL 3 BASIC20.22■□□□□ 0.83
RNF25Q96BH1 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC20.22■□□□□ 0.83
RNF25Q96BH1 AC008687.6-201ENST00000596318 630 ntBASIC20.22■□□□□ 0.83
RNF25Q96BH1 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RNF25Q96BH1 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
RNF25Q96BH1 AL138781.2-201ENST00000617896 1843 ntBASIC20.22■□□□□ 0.83
RNF25Q96BH1 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RNF25Q96BH1 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RNF25Q96BH1 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RNF25Q96BH1 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
RNF25Q96BH1 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
RNF25Q96BH1 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RNF25Q96BH1 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RNF25Q96BH1 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC20.21■□□□□ 0.83
RNF25Q96BH1 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RNF25Q96BH1 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC20.21■□□□□ 0.83
RNF25Q96BH1 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
RNF25Q96BH1 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC20.21■□□□□ 0.83
RNF25Q96BH1 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC20.21■□□□□ 0.83
RNF25Q96BH1 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RNF25Q96BH1 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RNF25Q96BH1 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC20.21■□□□□ 0.83
RNF25Q96BH1 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC20.21■□□□□ 0.83
RNF25Q96BH1 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC20.21■□□□□ 0.83
RNF25Q96BH1 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
RNF25Q96BH1 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC20.21■□□□□ 0.83
RNF25Q96BH1 MAX-217ENST00000557277 728 ntTSL 3 BASIC20.21■□□□□ 0.83
RNF25Q96BH1 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC20.21■□□□□ 0.83
RNF25Q96BH1 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC20.21■□□□□ 0.83
RNF25Q96BH1 INO80E-214ENST00000620599 515 ntTSL 2 BASIC20.21■□□□□ 0.83
RNF25Q96BH1 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC20.21■□□□□ 0.83
RNF25Q96BH1 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RNF25Q96BH1 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC20.21■□□□□ 0.83
RNF25Q96BH1 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
RNF25Q96BH1 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RNF25Q96BH1 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC20.21■□□□□ 0.83
RNF25Q96BH1 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RNF25Q96BH1 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.2■□□□□ 0.82
RNF25Q96BH1 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RNF25Q96BH1 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RNF25Q96BH1 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC20.2■□□□□ 0.82
RNF25Q96BH1 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
RNF25Q96BH1 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC20.2■□□□□ 0.82
RNF25Q96BH1 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
RNF25Q96BH1 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC20.2■□□□□ 0.82
RNF25Q96BH1 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC20.2■□□□□ 0.82
RNF25Q96BH1 AL355802.2-201ENST00000402069 882 ntBASIC20.2■□□□□ 0.82
RNF25Q96BH1 YBX1P10-201ENST00000444752 975 ntBASIC20.2■□□□□ 0.82
RNF25Q96BH1 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC20.2■□□□□ 0.82
RNF25Q96BH1 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RNF25Q96BH1 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC20.2■□□□□ 0.82
RNF25Q96BH1 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC20.2■□□□□ 0.82
RNF25Q96BH1 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC20.2■□□□□ 0.82
RNF25Q96BH1 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
RNF25Q96BH1 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
RNF25Q96BH1 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
RNF25Q96BH1 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
RNF25Q96BH1 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
RNF25Q96BH1 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC20.19■□□□□ 0.82
RNF25Q96BH1 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RNF25Q96BH1 AL049812.1-201ENST00000432563 2267 ntBASIC20.19■□□□□ 0.82
RNF25Q96BH1 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RNF25Q96BH1 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
RNF25Q96BH1 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RNF25Q96BH1 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RNF25Q96BH1 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RNF25Q96BH1 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RNF25Q96BH1 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RNF25Q96BH1 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RNF25Q96BH1 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RNF25Q96BH1 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RNF25Q96BH1 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms