Protein–RNA interactions for Protein: Q92854

SEMA4D, Semaphorin-4D, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4DQ92854 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
SEMA4DQ92854 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SEMA4DQ92854 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
SEMA4DQ92854 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC20.74■□□□□ 0.91
SEMA4DQ92854 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
SEMA4DQ92854 AC087289.5-201ENST00000586076 3175 ntBASIC20.74■□□□□ 0.91
SEMA4DQ92854 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
SEMA4DQ92854 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SEMA4DQ92854 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SEMA4DQ92854 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SEMA4DQ92854 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC20.74■□□□□ 0.91
SEMA4DQ92854 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SEMA4DQ92854 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
SEMA4DQ92854 AL049812.1-201ENST00000432563 2267 ntBASIC20.73■□□□□ 0.91
SEMA4DQ92854 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SEMA4DQ92854 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SEMA4DQ92854 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SEMA4DQ92854 KSR1P1-201ENST00000446298 240 ntBASIC20.73■□□□□ 0.91
SEMA4DQ92854 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC20.73■□□□□ 0.91
SEMA4DQ92854 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SEMA4DQ92854 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC20.73■□□□□ 0.91
SEMA4DQ92854 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC20.73■□□□□ 0.91
SEMA4DQ92854 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SEMA4DQ92854 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SEMA4DQ92854 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC20.73■□□□□ 0.91
SEMA4DQ92854 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SEMA4DQ92854 AL161938.1-201ENST00000569833 2180 ntBASIC20.73■□□□□ 0.91
SEMA4DQ92854 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC20.73■□□□□ 0.91
SEMA4DQ92854 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
SEMA4DQ92854 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC20.73■□□□□ 0.91
SEMA4DQ92854 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
SEMA4DQ92854 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SEMA4DQ92854 AC098818.2-201ENST00000564925 2320 ntBASIC20.72■□□□□ 0.91
SEMA4DQ92854 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC20.72■□□□□ 0.91
SEMA4DQ92854 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SEMA4DQ92854 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
SEMA4DQ92854 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC20.72■□□□□ 0.91
SEMA4DQ92854 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
SEMA4DQ92854 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
SEMA4DQ92854 SAPCD2P4-201ENST00000424595 1171 ntBASIC20.72■□□□□ 0.91
SEMA4DQ92854 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SEMA4DQ92854 REXO2-216ENST00000544196 452 ntTSL 3 BASIC20.72■□□□□ 0.91
SEMA4DQ92854 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC20.72■□□□□ 0.91
SEMA4DQ92854 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC20.72■□□□□ 0.91
SEMA4DQ92854 RPS15-203ENST00000586096 570 ntTSL 2 BASIC20.72■□□□□ 0.91
SEMA4DQ92854 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC20.72■□□□□ 0.91
SEMA4DQ92854 CR392000.1-201ENST00000624770 1228 ntBASIC20.72■□□□□ 0.91
SEMA4DQ92854 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC20.72■□□□□ 0.91
SEMA4DQ92854 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SEMA4DQ92854 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SEMA4DQ92854 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SEMA4DQ92854 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SEMA4DQ92854 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SEMA4DQ92854 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SEMA4DQ92854 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SEMA4DQ92854 AP000974.1-201ENST00000623909 2387 ntBASIC20.71■□□□□ 0.91
SEMA4DQ92854 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC20.71■□□□□ 0.91
SEMA4DQ92854 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SEMA4DQ92854 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SEMA4DQ92854 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SEMA4DQ92854 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
SEMA4DQ92854 AL353807.1-201ENST00000427475 662 ntBASIC20.71■□□□□ 0.91
SEMA4DQ92854 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
SEMA4DQ92854 PPP1R14BP5-201ENST00000440334 435 ntBASIC20.71■□□□□ 0.91
SEMA4DQ92854 Z99916.2-201ENST00000604037 246 ntBASIC20.71■□□□□ 0.91
SEMA4DQ92854 AC073195.1-201ENST00000607241 877 ntBASIC20.71■□□□□ 0.91
SEMA4DQ92854 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC20.71■□□□□ 0.91
SEMA4DQ92854 MME-217ENST00000616757 1315 ntTSL 5 BASIC20.71■□□□□ 0.91
SEMA4DQ92854 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SEMA4DQ92854 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SEMA4DQ92854 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
SEMA4DQ92854 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SEMA4DQ92854 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
SEMA4DQ92854 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC20.7■□□□□ 0.9
SEMA4DQ92854 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC20.7■□□□□ 0.9
SEMA4DQ92854 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC20.7■□□□□ 0.9
SEMA4DQ92854 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC20.7■□□□□ 0.9
SEMA4DQ92854 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
SEMA4DQ92854 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SEMA4DQ92854 RPS2P55-201ENST00000397318 883 ntBASIC20.7■□□□□ 0.9
SEMA4DQ92854 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SEMA4DQ92854 AC107956.1-201ENST00000494359 873 ntBASIC20.7■□□□□ 0.9
SEMA4DQ92854 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC20.7■□□□□ 0.9
SEMA4DQ92854 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC20.7■□□□□ 0.9
SEMA4DQ92854 USP36-216ENST00000589424 970 ntTSL 5 BASIC20.7■□□□□ 0.9
SEMA4DQ92854 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC20.7■□□□□ 0.9
SEMA4DQ92854 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SEMA4DQ92854 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.7■□□□□ 0.9
SEMA4DQ92854 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
SEMA4DQ92854 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
SEMA4DQ92854 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SEMA4DQ92854 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
SEMA4DQ92854 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC20.7■□□□□ 0.9
SEMA4DQ92854 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
SEMA4DQ92854 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SEMA4DQ92854 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SEMA4DQ92854 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SEMA4DQ92854 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SEMA4DQ92854 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC20.69■□□□□ 0.9
SEMA4DQ92854 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms