Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
SLC44A1Q8WWI5 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.31■□□□□ 0.68
SLC44A1Q8WWI5 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
SLC44A1Q8WWI5 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC19.31■□□□□ 0.68
SLC44A1Q8WWI5 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.31■□□□□ 0.68
SLC44A1Q8WWI5 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SLC44A1Q8WWI5 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
SLC44A1Q8WWI5 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SLC44A1Q8WWI5 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
SLC44A1Q8WWI5 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC19.31■□□□□ 0.68
SLC44A1Q8WWI5 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SLC44A1Q8WWI5 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC19.31■□□□□ 0.68
SLC44A1Q8WWI5 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
SLC44A1Q8WWI5 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC19.31■□□□□ 0.68
SLC44A1Q8WWI5 AL137784.2-201ENST00000607332 1000 ntBASIC19.31■□□□□ 0.68
SLC44A1Q8WWI5 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
SLC44A1Q8WWI5 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
SLC44A1Q8WWI5 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SLC44A1Q8WWI5 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
SLC44A1Q8WWI5 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SLC44A1Q8WWI5 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
SLC44A1Q8WWI5 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SLC44A1Q8WWI5 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC19.31■□□□□ 0.68
SLC44A1Q8WWI5 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
SLC44A1Q8WWI5 AP006587.1-201ENST00000534129 1502 ntBASIC19.3■□□□□ 0.68
SLC44A1Q8WWI5 AL390961.4-201ENST00000623958 2535 ntBASIC19.3■□□□□ 0.68
SLC44A1Q8WWI5 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC19.3■□□□□ 0.68
SLC44A1Q8WWI5 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SLC44A1Q8WWI5 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC19.3■□□□□ 0.68
SLC44A1Q8WWI5 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC19.3■□□□□ 0.68
SLC44A1Q8WWI5 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
SLC44A1Q8WWI5 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SLC44A1Q8WWI5 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SLC44A1Q8WWI5 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SLC44A1Q8WWI5 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC19.3■□□□□ 0.68
SLC44A1Q8WWI5 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC19.3■□□□□ 0.68
SLC44A1Q8WWI5 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC19.3■□□□□ 0.68
SLC44A1Q8WWI5 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC19.3■□□□□ 0.68
SLC44A1Q8WWI5 MAX-217ENST00000557277 728 ntTSL 3 BASIC19.3■□□□□ 0.68
SLC44A1Q8WWI5 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC19.3■□□□□ 0.68
SLC44A1Q8WWI5 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC19.3■□□□□ 0.68
SLC44A1Q8WWI5 AC073111.5-205ENST00000641717 521 ntBASIC19.3■□□□□ 0.68
SLC44A1Q8WWI5 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SLC44A1Q8WWI5 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC19.3■□□□□ 0.68
SLC44A1Q8WWI5 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC19.3■□□□□ 0.68
SLC44A1Q8WWI5 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SLC44A1Q8WWI5 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
SLC44A1Q8WWI5 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SLC44A1Q8WWI5 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SLC44A1Q8WWI5 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SLC44A1Q8WWI5 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLC44A1Q8WWI5 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
SLC44A1Q8WWI5 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLC44A1Q8WWI5 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLC44A1Q8WWI5 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLC44A1Q8WWI5 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLC44A1Q8WWI5 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC19.29■□□□□ 0.68
SLC44A1Q8WWI5 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
SLC44A1Q8WWI5 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC19.29■□□□□ 0.68
SLC44A1Q8WWI5 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC19.29■□□□□ 0.68
SLC44A1Q8WWI5 FEM1AP3-201ENST00000403722 1741 ntBASIC19.29■□□□□ 0.68
SLC44A1Q8WWI5 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLC44A1Q8WWI5 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC19.29■□□□□ 0.68
SLC44A1Q8WWI5 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLC44A1Q8WWI5 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLC44A1Q8WWI5 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC19.29■□□□□ 0.68
SLC44A1Q8WWI5 RAP2CP1-201ENST00000605103 478 ntBASIC19.29■□□□□ 0.68
SLC44A1Q8WWI5 AC080038.1-201ENST00000611274 1154 ntBASIC19.29■□□□□ 0.68
SLC44A1Q8WWI5 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC19.29■□□□□ 0.68
SLC44A1Q8WWI5 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLC44A1Q8WWI5 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLC44A1Q8WWI5 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLC44A1Q8WWI5 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
SLC44A1Q8WWI5 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC19.29■□□□□ 0.68
SLC44A1Q8WWI5 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLC44A1Q8WWI5 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC19.29■□□□□ 0.68
SLC44A1Q8WWI5 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC19.29■□□□□ 0.68
SLC44A1Q8WWI5 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC19.29■□□□□ 0.68
SLC44A1Q8WWI5 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLC44A1Q8WWI5 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLC44A1Q8WWI5 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SLC44A1Q8WWI5 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
SLC44A1Q8WWI5 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLC44A1Q8WWI5 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLC44A1Q8WWI5 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC19.28■□□□□ 0.68
SLC44A1Q8WWI5 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
SLC44A1Q8WWI5 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.28■□□□□ 0.68
SLC44A1Q8WWI5 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLC44A1Q8WWI5 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLC44A1Q8WWI5 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SLC44A1Q8WWI5 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC19.28■□□□□ 0.68
SLC44A1Q8WWI5 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC19.28■□□□□ 0.68
SLC44A1Q8WWI5 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
SLC44A1Q8WWI5 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC19.28■□□□□ 0.68
SLC44A1Q8WWI5 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC19.28■□□□□ 0.68
SLC44A1Q8WWI5 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC19.28■□□□□ 0.68
SLC44A1Q8WWI5 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SLC44A1Q8WWI5 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC19.28■□□□□ 0.68
SLC44A1Q8WWI5 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SLC44A1Q8WWI5 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms