Protein–RNA interactions for Protein: Q8TBE3

FNDC9, Fibronectin type III domain-containing protein 9, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC9Q8TBE3 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC17.34■□□□□ 0.37
FNDC9Q8TBE3 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC17.34■□□□□ 0.37
FNDC9Q8TBE3 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
FNDC9Q8TBE3 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
FNDC9Q8TBE3 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC17.34■□□□□ 0.37
FNDC9Q8TBE3 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
FNDC9Q8TBE3 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
FNDC9Q8TBE3 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
FNDC9Q8TBE3 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
FNDC9Q8TBE3 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
FNDC9Q8TBE3 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC17.33■□□□□ 0.37
FNDC9Q8TBE3 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
FNDC9Q8TBE3 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
FNDC9Q8TBE3 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
FNDC9Q8TBE3 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
FNDC9Q8TBE3 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
FNDC9Q8TBE3 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
FNDC9Q8TBE3 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
FNDC9Q8TBE3 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC17.33■□□□□ 0.36
FNDC9Q8TBE3 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC17.33■□□□□ 0.36
FNDC9Q8TBE3 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
FNDC9Q8TBE3 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
FNDC9Q8TBE3 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
FNDC9Q8TBE3 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
FNDC9Q8TBE3 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
FNDC9Q8TBE3 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC17.33■□□□□ 0.36
FNDC9Q8TBE3 LINC01465-201ENST00000408887 1940 ntBASIC17.33■□□□□ 0.36
FNDC9Q8TBE3 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC17.33■□□□□ 0.36
FNDC9Q8TBE3 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
FNDC9Q8TBE3 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
FNDC9Q8TBE3 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
FNDC9Q8TBE3 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
FNDC9Q8TBE3 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
FNDC9Q8TBE3 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC17.32■□□□□ 0.36
FNDC9Q8TBE3 AFG3L1P-217ENST00000557444 2447 ntBASIC17.32■□□□□ 0.36
FNDC9Q8TBE3 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC17.32■□□□□ 0.36
FNDC9Q8TBE3 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
FNDC9Q8TBE3 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
FNDC9Q8TBE3 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
FNDC9Q8TBE3 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
FNDC9Q8TBE3 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
FNDC9Q8TBE3 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
FNDC9Q8TBE3 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
FNDC9Q8TBE3 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC17.32■□□□□ 0.36
FNDC9Q8TBE3 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
FNDC9Q8TBE3 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
FNDC9Q8TBE3 UNC93B2-201ENST00000285383 730 ntBASIC17.32■□□□□ 0.36
FNDC9Q8TBE3 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
FNDC9Q8TBE3 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC17.32■□□□□ 0.36
FNDC9Q8TBE3 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC17.32■□□□□ 0.36
FNDC9Q8TBE3 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC17.32■□□□□ 0.36
FNDC9Q8TBE3 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
FNDC9Q8TBE3 MIR6786-201ENST00000616843 113 ntBASIC17.32■□□□□ 0.36
FNDC9Q8TBE3 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
FNDC9Q8TBE3 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC17.32■□□□□ 0.36
FNDC9Q8TBE3 ME2-218ENST00000640965 2476 ntTSL 5 BASIC17.32■□□□□ 0.36
FNDC9Q8TBE3 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC17.32■□□□□ 0.36
FNDC9Q8TBE3 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
FNDC9Q8TBE3 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
FNDC9Q8TBE3 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
FNDC9Q8TBE3 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC17.32■□□□□ 0.36
FNDC9Q8TBE3 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC17.32■□□□□ 0.36
FNDC9Q8TBE3 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC17.32■□□□□ 0.36
FNDC9Q8TBE3 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
FNDC9Q8TBE3 FSCN1P1-201ENST00000568912 1481 ntBASIC17.31■□□□□ 0.36
FNDC9Q8TBE3 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
FNDC9Q8TBE3 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
FNDC9Q8TBE3 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
FNDC9Q8TBE3 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
FNDC9Q8TBE3 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
FNDC9Q8TBE3 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
FNDC9Q8TBE3 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
FNDC9Q8TBE3 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
FNDC9Q8TBE3 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
FNDC9Q8TBE3 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
FNDC9Q8TBE3 B3GAT3P1-201ENST00000471720 806 ntBASIC17.31■□□□□ 0.36
FNDC9Q8TBE3 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
FNDC9Q8TBE3 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC17.31■□□□□ 0.36
FNDC9Q8TBE3 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC17.31■□□□□ 0.36
FNDC9Q8TBE3 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC17.31■□□□□ 0.36
FNDC9Q8TBE3 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC17.31■□□□□ 0.36
FNDC9Q8TBE3 AP000525.1-201ENST00000608286 694 ntBASIC17.31■□□□□ 0.36
FNDC9Q8TBE3 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC17.31■□□□□ 0.36
FNDC9Q8TBE3 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
FNDC9Q8TBE3 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
FNDC9Q8TBE3 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
FNDC9Q8TBE3 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC17.31■□□□□ 0.36
FNDC9Q8TBE3 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC17.31■□□□□ 0.36
FNDC9Q8TBE3 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
FNDC9Q8TBE3 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
FNDC9Q8TBE3 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
FNDC9Q8TBE3 AC079598.2-202ENST00000546624 1451 ntBASIC17.31■□□□□ 0.36
FNDC9Q8TBE3 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC17.31■□□□□ 0.36
FNDC9Q8TBE3 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC17.3■□□□□ 0.36
FNDC9Q8TBE3 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
FNDC9Q8TBE3 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
FNDC9Q8TBE3 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
FNDC9Q8TBE3 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC17.3■□□□□ 0.36
FNDC9Q8TBE3 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
FNDC9Q8TBE3 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms