Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
LINC01006Q8NI28 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LINC01006Q8NI28 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC15□□□□□ -0.01
LINC01006Q8NI28 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
LINC01006Q8NI28 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LINC01006Q8NI28 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC15□□□□□ -0.01
LINC01006Q8NI28 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC15□□□□□ -0.01
LINC01006Q8NI28 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC15□□□□□ -0.01
LINC01006Q8NI28 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC15□□□□□ -0.01
LINC01006Q8NI28 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC15□□□□□ -0.01
LINC01006Q8NI28 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LINC01006Q8NI28 BUB3-202ENST00000368859 667 ntTSL 3 BASIC15□□□□□ -0.01
LINC01006Q8NI28 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC15□□□□□ -0.01
LINC01006Q8NI28 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC15□□□□□ -0.01
LINC01006Q8NI28 VENTXP5-201ENST00000523979 775 ntBASIC15□□□□□ -0.01
LINC01006Q8NI28 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC15□□□□□ -0.01
LINC01006Q8NI28 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC15□□□□□ -0.01
LINC01006Q8NI28 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LINC01006Q8NI28 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
LINC01006Q8NI28 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
LINC01006Q8NI28 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
LINC01006Q8NI28 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC15□□□□□ -0.01
LINC01006Q8NI28 AL162377.1-201ENST00000618844 1793 ntBASIC15□□□□□ -0.01
LINC01006Q8NI28 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
LINC01006Q8NI28 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC15□□□□□ -0.01
LINC01006Q8NI28 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LINC01006Q8NI28 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
LINC01006Q8NI28 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC15□□□□□ -0.01
LINC01006Q8NI28 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
LINC01006Q8NI28 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
LINC01006Q8NI28 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LINC01006Q8NI28 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LINC01006Q8NI28 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
LINC01006Q8NI28 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
LINC01006Q8NI28 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC14.99□□□□□ -0.01
LINC01006Q8NI28 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
LINC01006Q8NI28 STARP1-201ENST00000397973 869 ntBASIC14.99□□□□□ -0.01
LINC01006Q8NI28 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
LINC01006Q8NI28 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC14.99□□□□□ -0.01
LINC01006Q8NI28 PTK2-216ENST00000519881 863 ntTSL 3 BASIC14.99□□□□□ -0.01
LINC01006Q8NI28 GCSHP2-201ENST00000560971 527 ntBASIC14.99□□□□□ -0.01
LINC01006Q8NI28 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC14.99□□□□□ -0.01
LINC01006Q8NI28 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC14.99□□□□□ -0.01
LINC01006Q8NI28 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC14.99□□□□□ -0.01
LINC01006Q8NI28 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LINC01006Q8NI28 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LINC01006Q8NI28 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LINC01006Q8NI28 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
LINC01006Q8NI28 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
LINC01006Q8NI28 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
LINC01006Q8NI28 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC14.98□□□□□ -0.01
LINC01006Q8NI28 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LINC01006Q8NI28 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LINC01006Q8NI28 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC14.98□□□□□ -0.01
LINC01006Q8NI28 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
LINC01006Q8NI28 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LINC01006Q8NI28 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC14.98□□□□□ -0.01
LINC01006Q8NI28 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
LINC01006Q8NI28 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
LINC01006Q8NI28 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC14.98□□□□□ -0.01
LINC01006Q8NI28 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC14.98□□□□□ -0.01
LINC01006Q8NI28 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
LINC01006Q8NI28 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC14.98□□□□□ -0.01
LINC01006Q8NI28 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
LINC01006Q8NI28 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC14.98□□□□□ -0.01
LINC01006Q8NI28 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
LINC01006Q8NI28 LY6E-213ENST00000522528 606 ntTSL 3 BASIC14.98□□□□□ -0.01
LINC01006Q8NI28 ZNF444P1-201ENST00000559497 298 ntBASIC14.98□□□□□ -0.01
LINC01006Q8NI28 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC14.98□□□□□ -0.01
LINC01006Q8NI28 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC14.98□□□□□ -0.01
LINC01006Q8NI28 AC069148.1-201ENST00000608741 768 ntBASIC14.98□□□□□ -0.01
LINC01006Q8NI28 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC14.98□□□□□ -0.01
LINC01006Q8NI28 DFFB-212ENST00000625756 649 ntTSL 5 BASIC14.98□□□□□ -0.01
LINC01006Q8NI28 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
LINC01006Q8NI28 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LINC01006Q8NI28 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC14.97□□□□□ -0.01
LINC01006Q8NI28 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
LINC01006Q8NI28 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LINC01006Q8NI28 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
LINC01006Q8NI28 IPPK-202ENST00000375522 882 ntTSL 3 BASIC14.97□□□□□ -0.01
LINC01006Q8NI28 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC14.97□□□□□ -0.01
LINC01006Q8NI28 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC14.97□□□□□ -0.01
LINC01006Q8NI28 HCG4P8-203ENST00000443049 980 ntBASIC14.97□□□□□ -0.01
LINC01006Q8NI28 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC14.97□□□□□ -0.01
LINC01006Q8NI28 CD81-212ENST00000526072 1172 ntTSL 5 BASIC14.97□□□□□ -0.01
LINC01006Q8NI28 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC14.97□□□□□ -0.01
LINC01006Q8NI28 AC083849.1-201ENST00000615227 514 ntBASIC14.97□□□□□ -0.01
LINC01006Q8NI28 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LINC01006Q8NI28 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LINC01006Q8NI28 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LINC01006Q8NI28 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
LINC01006Q8NI28 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
LINC01006Q8NI28 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LINC01006Q8NI28 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LINC01006Q8NI28 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
LINC01006Q8NI28 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
LINC01006Q8NI28 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
LINC01006Q8NI28 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
LINC01006Q8NI28 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC14.96□□□□□ -0.01
LINC01006Q8NI28 TBC1D3P2-202ENST00000577902 1649 ntBASIC14.96□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms