Protein–RNA interactions for Protein: Q8NCN4

RNF169, E3 ubiquitin-protein ligase RNF169, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF169Q8NCN4 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
RNF169Q8NCN4 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RNF169Q8NCN4 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
RNF169Q8NCN4 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.95■□□□□ 0.95
RNF169Q8NCN4 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RNF169Q8NCN4 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
RNF169Q8NCN4 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC20.95■□□□□ 0.94
RNF169Q8NCN4 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RNF169Q8NCN4 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.95■□□□□ 0.94
RNF169Q8NCN4 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RNF169Q8NCN4 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RNF169Q8NCN4 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RNF169Q8NCN4 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.95■□□□□ 0.94
RNF169Q8NCN4 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC20.95■□□□□ 0.94
RNF169Q8NCN4 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RNF169Q8NCN4 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RNF169Q8NCN4 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC20.95■□□□□ 0.94
RNF169Q8NCN4 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC20.95■□□□□ 0.94
RNF169Q8NCN4 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC20.95■□□□□ 0.94
RNF169Q8NCN4 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RNF169Q8NCN4 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC20.95■□□□□ 0.94
RNF169Q8NCN4 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.95■□□□□ 0.94
RNF169Q8NCN4 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
RNF169Q8NCN4 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
RNF169Q8NCN4 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
RNF169Q8NCN4 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
RNF169Q8NCN4 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC20.95■□□□□ 0.94
RNF169Q8NCN4 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RNF169Q8NCN4 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RNF169Q8NCN4 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
RNF169Q8NCN4 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.94■□□□□ 0.94
RNF169Q8NCN4 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
RNF169Q8NCN4 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC20.94■□□□□ 0.94
RNF169Q8NCN4 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RNF169Q8NCN4 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
RNF169Q8NCN4 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
RNF169Q8NCN4 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.94■□□□□ 0.94
RNF169Q8NCN4 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
RNF169Q8NCN4 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC20.94■□□□□ 0.94
RNF169Q8NCN4 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC20.94■□□□□ 0.94
RNF169Q8NCN4 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC20.94■□□□□ 0.94
RNF169Q8NCN4 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
RNF169Q8NCN4 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
RNF169Q8NCN4 AC099778.1-201ENST00000568593 1911 ntBASIC20.94■□□□□ 0.94
RNF169Q8NCN4 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RNF169Q8NCN4 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RNF169Q8NCN4 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC20.93■□□□□ 0.94
RNF169Q8NCN4 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
RNF169Q8NCN4 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC20.93■□□□□ 0.94
RNF169Q8NCN4 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
RNF169Q8NCN4 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RNF169Q8NCN4 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
RNF169Q8NCN4 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC20.93■□□□□ 0.94
RNF169Q8NCN4 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
RNF169Q8NCN4 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RNF169Q8NCN4 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC20.93■□□□□ 0.94
RNF169Q8NCN4 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
RNF169Q8NCN4 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RNF169Q8NCN4 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RNF169Q8NCN4 CD70-202ENST00000423145 881 ntTSL 2 BASIC20.93■□□□□ 0.94
RNF169Q8NCN4 AC117947.1-201ENST00000427448 529 ntBASIC20.93■□□□□ 0.94
RNF169Q8NCN4 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC20.93■□□□□ 0.94
RNF169Q8NCN4 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RNF169Q8NCN4 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
RNF169Q8NCN4 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC20.93■□□□□ 0.94
RNF169Q8NCN4 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC20.93■□□□□ 0.94
RNF169Q8NCN4 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC20.93■□□□□ 0.94
RNF169Q8NCN4 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC20.93■□□□□ 0.94
RNF169Q8NCN4 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RNF169Q8NCN4 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RNF169Q8NCN4 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
RNF169Q8NCN4 KRT8P41-201ENST00000533985 1514 ntBASIC20.93■□□□□ 0.94
RNF169Q8NCN4 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
RNF169Q8NCN4 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RNF169Q8NCN4 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RNF169Q8NCN4 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
RNF169Q8NCN4 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RNF169Q8NCN4 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC20.92■□□□□ 0.94
RNF169Q8NCN4 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
RNF169Q8NCN4 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RNF169Q8NCN4 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RNF169Q8NCN4 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RNF169Q8NCN4 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC20.92■□□□□ 0.94
RNF169Q8NCN4 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC20.92■□□□□ 0.94
RNF169Q8NCN4 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC20.92■□□□□ 0.94
RNF169Q8NCN4 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
RNF169Q8NCN4 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RNF169Q8NCN4 AC092338.2-201ENST00000568827 1415 ntBASIC20.92■□□□□ 0.94
RNF169Q8NCN4 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RNF169Q8NCN4 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC20.92■□□□□ 0.94
RNF169Q8NCN4 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RNF169Q8NCN4 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RNF169Q8NCN4 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RNF169Q8NCN4 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RNF169Q8NCN4 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RNF169Q8NCN4 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.92■□□□□ 0.94
RNF169Q8NCN4 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RNF169Q8NCN4 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RNF169Q8NCN4 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
RNF169Q8NCN4 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms