Protein–RNA interactions for Protein: Q8NAE3

LINC01555, Putative uncharacterized protein encoded by LINC01555, humanhuman

Predictions only

Length 123 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01555Q8NAE3 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LINC01555Q8NAE3 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LINC01555Q8NAE3 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LINC01555Q8NAE3 UNC93B2-201ENST00000285383 730 ntBASIC18.56■□□□□ 0.56
LINC01555Q8NAE3 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LINC01555Q8NAE3 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LINC01555Q8NAE3 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC18.56■□□□□ 0.56
LINC01555Q8NAE3 AP000692.2-201ENST00000608391 879 ntBASIC18.56■□□□□ 0.56
LINC01555Q8NAE3 DGCR10-201ENST00000609839 495 ntBASIC18.56■□□□□ 0.56
LINC01555Q8NAE3 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.56■□□□□ 0.56
LINC01555Q8NAE3 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC18.56■□□□□ 0.56
LINC01555Q8NAE3 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC18.56■□□□□ 0.56
LINC01555Q8NAE3 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC18.56■□□□□ 0.56
LINC01555Q8NAE3 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
LINC01555Q8NAE3 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
LINC01555Q8NAE3 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC18.56■□□□□ 0.56
LINC01555Q8NAE3 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LINC01555Q8NAE3 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.55■□□□□ 0.56
LINC01555Q8NAE3 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
LINC01555Q8NAE3 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC18.55■□□□□ 0.56
LINC01555Q8NAE3 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
LINC01555Q8NAE3 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LINC01555Q8NAE3 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
LINC01555Q8NAE3 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LINC01555Q8NAE3 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC18.55■□□□□ 0.56
LINC01555Q8NAE3 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LINC01555Q8NAE3 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC18.55■□□□□ 0.56
LINC01555Q8NAE3 TEX21P-204ENST00000641479 1693 ntBASIC18.55■□□□□ 0.56
LINC01555Q8NAE3 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
LINC01555Q8NAE3 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LINC01555Q8NAE3 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
LINC01555Q8NAE3 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
LINC01555Q8NAE3 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
LINC01555Q8NAE3 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LINC01555Q8NAE3 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
LINC01555Q8NAE3 FAM207BP-201ENST00000447172 505 ntBASIC18.55■□□□□ 0.56
LINC01555Q8NAE3 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.55■□□□□ 0.56
LINC01555Q8NAE3 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LINC01555Q8NAE3 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LINC01555Q8NAE3 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LINC01555Q8NAE3 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC18.55■□□□□ 0.56
LINC01555Q8NAE3 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
LINC01555Q8NAE3 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LINC01555Q8NAE3 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC18.55■□□□□ 0.56
LINC01555Q8NAE3 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LINC01555Q8NAE3 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.54■□□□□ 0.56
LINC01555Q8NAE3 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.54■□□□□ 0.56
LINC01555Q8NAE3 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC18.54■□□□□ 0.56
LINC01555Q8NAE3 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LINC01555Q8NAE3 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LINC01555Q8NAE3 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
LINC01555Q8NAE3 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LINC01555Q8NAE3 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC18.54■□□□□ 0.56
LINC01555Q8NAE3 BX088651.1-201ENST00000540551 451 ntBASIC18.54■□□□□ 0.56
LINC01555Q8NAE3 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC18.54■□□□□ 0.56
LINC01555Q8NAE3 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LINC01555Q8NAE3 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC18.54■□□□□ 0.56
LINC01555Q8NAE3 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC18.54■□□□□ 0.56
LINC01555Q8NAE3 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LINC01555Q8NAE3 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC18.54■□□□□ 0.56
LINC01555Q8NAE3 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
LINC01555Q8NAE3 KRT8P11-201ENST00000409686 1436 ntBASIC18.54■□□□□ 0.56
LINC01555Q8NAE3 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LINC01555Q8NAE3 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
LINC01555Q8NAE3 AC005332.7-201ENST00000614046 2005 ntBASIC18.54■□□□□ 0.56
LINC01555Q8NAE3 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC18.54■□□□□ 0.56
LINC01555Q8NAE3 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LINC01555Q8NAE3 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
LINC01555Q8NAE3 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LINC01555Q8NAE3 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
LINC01555Q8NAE3 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
LINC01555Q8NAE3 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LINC01555Q8NAE3 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
LINC01555Q8NAE3 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.53■□□□□ 0.56
LINC01555Q8NAE3 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
LINC01555Q8NAE3 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC18.53■□□□□ 0.56
LINC01555Q8NAE3 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC18.53■□□□□ 0.56
LINC01555Q8NAE3 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LINC01555Q8NAE3 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC18.53■□□□□ 0.56
LINC01555Q8NAE3 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
LINC01555Q8NAE3 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC18.53■□□□□ 0.56
LINC01555Q8NAE3 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LINC01555Q8NAE3 AL390955.1-201ENST00000428694 934 ntBASIC18.53■□□□□ 0.56
LINC01555Q8NAE3 TSPY23P-201ENST00000440136 739 ntBASIC18.53■□□□□ 0.56
LINC01555Q8NAE3 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC18.53■□□□□ 0.56
LINC01555Q8NAE3 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LINC01555Q8NAE3 FDX2-206ENST00000492239 773 ntTSL 2 BASIC18.53■□□□□ 0.56
LINC01555Q8NAE3 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC18.53■□□□□ 0.56
LINC01555Q8NAE3 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC18.53■□□□□ 0.56
LINC01555Q8NAE3 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LINC01555Q8NAE3 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LINC01555Q8NAE3 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC18.53■□□□□ 0.56
LINC01555Q8NAE3 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LINC01555Q8NAE3 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
LINC01555Q8NAE3 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC18.52■□□□□ 0.56
LINC01555Q8NAE3 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LINC01555Q8NAE3 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LINC01555Q8NAE3 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LINC01555Q8NAE3 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
LINC01555Q8NAE3 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms