Protein–RNA interactions for Protein: Q8N998

CCDC89, Coiled-coil domain-containing protein 89, humanhuman

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC89Q8N998 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC89Q8N998 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC89Q8N998 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC89Q8N998 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC89Q8N998 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC19.97■□□□□ 0.79
CCDC89Q8N998 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC19.97■□□□□ 0.79
CCDC89Q8N998 MIR4758-201ENST00000577688 71 ntBASIC19.97■□□□□ 0.79
CCDC89Q8N998 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC89Q8N998 WT1-AS_3.1-201ENST00000613262 234 ntBASIC19.97■□□□□ 0.79
CCDC89Q8N998 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC89Q8N998 AC006333.2-201ENST00000607957 2099 ntBASIC19.97■□□□□ 0.79
CCDC89Q8N998 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC89Q8N998 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC19.97■□□□□ 0.79
CCDC89Q8N998 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC19.97■□□□□ 0.79
CCDC89Q8N998 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.97■□□□□ 0.79
CCDC89Q8N998 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC89Q8N998 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC19.97■□□□□ 0.79
CCDC89Q8N998 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC89Q8N998 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC89Q8N998 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC89Q8N998 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC89Q8N998 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CCDC89Q8N998 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC89Q8N998 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC89Q8N998 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC89Q8N998 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC89Q8N998 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC19.96■□□□□ 0.79
CCDC89Q8N998 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC89Q8N998 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC19.96■□□□□ 0.79
CCDC89Q8N998 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
CCDC89Q8N998 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC19.96■□□□□ 0.79
CCDC89Q8N998 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC89Q8N998 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC89Q8N998 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC89Q8N998 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC89Q8N998 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.96■□□□□ 0.79
CCDC89Q8N998 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC89Q8N998 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC19.96■□□□□ 0.79
CCDC89Q8N998 PPP1R14BP3-201ENST00000509033 445 ntBASIC19.96■□□□□ 0.79
CCDC89Q8N998 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC19.96■□□□□ 0.79
CCDC89Q8N998 MAX-217ENST00000557277 728 ntTSL 3 BASIC19.96■□□□□ 0.79
CCDC89Q8N998 AL121906.2-201ENST00000621597 723 ntBASIC19.96■□□□□ 0.79
CCDC89Q8N998 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC89Q8N998 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC89Q8N998 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC89Q8N998 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC89Q8N998 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC89Q8N998 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC89Q8N998 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC19.96■□□□□ 0.79
CCDC89Q8N998 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC19.96■□□□□ 0.79
CCDC89Q8N998 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CCDC89Q8N998 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC89Q8N998 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC89Q8N998 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC19.95■□□□□ 0.78
CCDC89Q8N998 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC19.95■□□□□ 0.78
CCDC89Q8N998 AC090340.1-201ENST00000620778 4980 ntBASIC19.95■□□□□ 0.78
CCDC89Q8N998 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC89Q8N998 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC19.95■□□□□ 0.78
CCDC89Q8N998 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC89Q8N998 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC89Q8N998 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
CCDC89Q8N998 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC19.95■□□□□ 0.78
CCDC89Q8N998 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC19.95■□□□□ 0.78
CCDC89Q8N998 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC19.95■□□□□ 0.78
CCDC89Q8N998 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
CCDC89Q8N998 TSPY6P-201ENST00000448518 926 ntBASIC19.95■□□□□ 0.78
CCDC89Q8N998 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC19.95■□□□□ 0.78
CCDC89Q8N998 AC097658.1-201ENST00000475555 843 ntBASIC19.95■□□□□ 0.78
CCDC89Q8N998 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC89Q8N998 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC19.95■□□□□ 0.78
CCDC89Q8N998 PFKL-212ENST00000628044 129 ntTSL 3 BASIC19.95■□□□□ 0.78
CCDC89Q8N998 AP006587.1-201ENST00000534129 1502 ntBASIC19.95■□□□□ 0.78
CCDC89Q8N998 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC89Q8N998 NEFHP1-201ENST00000412845 2629 ntBASIC19.95■□□□□ 0.78
CCDC89Q8N998 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
CCDC89Q8N998 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CCDC89Q8N998 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
CCDC89Q8N998 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
CCDC89Q8N998 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC89Q8N998 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC19.94■□□□□ 0.78
CCDC89Q8N998 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
CCDC89Q8N998 GOLGA6L3-201ENST00000507199 1679 ntBASIC19.94■□□□□ 0.78
CCDC89Q8N998 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC19.94■□□□□ 0.78
CCDC89Q8N998 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
CCDC89Q8N998 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC89Q8N998 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC89Q8N998 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC89Q8N998 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC19.94■□□□□ 0.78
CCDC89Q8N998 PPP1R14BP2-201ENST00000426284 444 ntBASIC19.94■□□□□ 0.78
CCDC89Q8N998 GUSBP6-202ENST00000438529 1198 ntBASIC19.94■□□□□ 0.78
CCDC89Q8N998 GATS-209ENST00000454084 1030 ntTSL 3 BASIC19.94■□□□□ 0.78
CCDC89Q8N998 RHEB-204ENST00000472642 900 ntTSL 3 BASIC19.94■□□□□ 0.78
CCDC89Q8N998 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC89Q8N998 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC19.94■□□□□ 0.78
CCDC89Q8N998 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
CCDC89Q8N998 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
CCDC89Q8N998 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC89Q8N998 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.94■□□□□ 0.78
CCDC89Q8N998 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CCDC89Q8N998 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms