Protein–RNA interactions for Protein: Q8N5U0

C11orf42, Uncharacterized protein C11orf42, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf42Q8N5U0 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC16.03■□□□□ 0.16
C11orf42Q8N5U0 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
C11orf42Q8N5U0 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.03■□□□□ 0.16
C11orf42Q8N5U0 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
C11orf42Q8N5U0 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.03■□□□□ 0.16
C11orf42Q8N5U0 TUBB8P6-201ENST00000436895 1288 ntBASIC16.03■□□□□ 0.16
C11orf42Q8N5U0 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.03■□□□□ 0.16
C11orf42Q8N5U0 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
C11orf42Q8N5U0 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC16.03■□□□□ 0.16
C11orf42Q8N5U0 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
C11orf42Q8N5U0 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC16.03■□□□□ 0.16
C11orf42Q8N5U0 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
C11orf42Q8N5U0 CABP2-204ENST00000636477 941 ntTSL 5 BASIC16.03■□□□□ 0.16
C11orf42Q8N5U0 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
C11orf42Q8N5U0 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC16.03■□□□□ 0.16
C11orf42Q8N5U0 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
C11orf42Q8N5U0 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
C11orf42Q8N5U0 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC16.03■□□□□ 0.16
C11orf42Q8N5U0 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
C11orf42Q8N5U0 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
C11orf42Q8N5U0 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
C11orf42Q8N5U0 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
C11orf42Q8N5U0 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
C11orf42Q8N5U0 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
C11orf42Q8N5U0 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC16.02■□□□□ 0.16
C11orf42Q8N5U0 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
C11orf42Q8N5U0 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
C11orf42Q8N5U0 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
C11orf42Q8N5U0 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
C11orf42Q8N5U0 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
C11orf42Q8N5U0 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC16.02■□□□□ 0.16
C11orf42Q8N5U0 STX6-204ENST00000542060 4809 ntTSL 2 BASIC16.02■□□□□ 0.16
C11orf42Q8N5U0 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
C11orf42Q8N5U0 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
C11orf42Q8N5U0 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC16.02■□□□□ 0.16
C11orf42Q8N5U0 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC16.02■□□□□ 0.16
C11orf42Q8N5U0 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC16.02■□□□□ 0.16
C11orf42Q8N5U0 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
C11orf42Q8N5U0 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
C11orf42Q8N5U0 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
C11orf42Q8N5U0 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
C11orf42Q8N5U0 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
C11orf42Q8N5U0 NME1-207ENST00000480143 964 ntTSL 2 BASIC16.02■□□□□ 0.16
C11orf42Q8N5U0 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
C11orf42Q8N5U0 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC16.02■□□□□ 0.16
C11orf42Q8N5U0 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
C11orf42Q8N5U0 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC16.02■□□□□ 0.16
C11orf42Q8N5U0 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC16.02■□□□□ 0.16
C11orf42Q8N5U0 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
C11orf42Q8N5U0 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
C11orf42Q8N5U0 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
C11orf42Q8N5U0 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
C11orf42Q8N5U0 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
C11orf42Q8N5U0 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
C11orf42Q8N5U0 KRT8P8-201ENST00000434750 1448 ntBASIC16.02■□□□□ 0.15
C11orf42Q8N5U0 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC16.02■□□□□ 0.15
C11orf42Q8N5U0 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
C11orf42Q8N5U0 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
C11orf42Q8N5U0 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
C11orf42Q8N5U0 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC16.01■□□□□ 0.15
C11orf42Q8N5U0 MME-217ENST00000616757 1315 ntTSL 5 BASIC16.01■□□□□ 0.15
C11orf42Q8N5U0 PWWP2AP1-201ENST00000429776 2273 ntBASIC16.01■□□□□ 0.15
C11orf42Q8N5U0 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
C11orf42Q8N5U0 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
C11orf42Q8N5U0 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
C11orf42Q8N5U0 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
C11orf42Q8N5U0 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
C11orf42Q8N5U0 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
C11orf42Q8N5U0 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
C11orf42Q8N5U0 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC16.01■□□□□ 0.15
C11orf42Q8N5U0 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
C11orf42Q8N5U0 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
C11orf42Q8N5U0 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC16.01■□□□□ 0.15
C11orf42Q8N5U0 RARRES2P10-201ENST00000564312 460 ntBASIC16.01■□□□□ 0.15
C11orf42Q8N5U0 C1QL1P1-201ENST00000568105 661 ntBASIC16.01■□□□□ 0.15
C11orf42Q8N5U0 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC16.01■□□□□ 0.15
C11orf42Q8N5U0 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
C11orf42Q8N5U0 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC16.01■□□□□ 0.15
C11orf42Q8N5U0 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
C11orf42Q8N5U0 AC090340.1-201ENST00000620778 4980 ntBASIC16.01■□□□□ 0.15
C11orf42Q8N5U0 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
C11orf42Q8N5U0 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
C11orf42Q8N5U0 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
C11orf42Q8N5U0 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC16.01■□□□□ 0.15
C11orf42Q8N5U0 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
C11orf42Q8N5U0 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
C11orf42Q8N5U0 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC16.01■□□□□ 0.15
C11orf42Q8N5U0 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
C11orf42Q8N5U0 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
C11orf42Q8N5U0 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC16.01■□□□□ 0.15
C11orf42Q8N5U0 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC16.01■□□□□ 0.15
C11orf42Q8N5U0 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC16.01■□□□□ 0.15
C11orf42Q8N5U0 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC16.01■□□□□ 0.15
C11orf42Q8N5U0 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
C11orf42Q8N5U0 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
C11orf42Q8N5U0 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
C11orf42Q8N5U0 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
C11orf42Q8N5U0 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
C11orf42Q8N5U0 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
C11orf42Q8N5U0 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms