Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
COL27A1Q8IZC6 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
COL27A1Q8IZC6 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
COL27A1Q8IZC6 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
COL27A1Q8IZC6 RASA4DP-201ENST00000460726 1199 ntBASIC18.2■□□□□ 0.5
COL27A1Q8IZC6 SEC1P-202ENST00000473944 940 ntBASIC18.2■□□□□ 0.5
COL27A1Q8IZC6 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC18.2■□□□□ 0.5
COL27A1Q8IZC6 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC18.2■□□□□ 0.5
COL27A1Q8IZC6 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC18.2■□□□□ 0.5
COL27A1Q8IZC6 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC18.2■□□□□ 0.5
COL27A1Q8IZC6 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
COL27A1Q8IZC6 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
COL27A1Q8IZC6 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC18.2■□□□□ 0.5
COL27A1Q8IZC6 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC18.2■□□□□ 0.5
COL27A1Q8IZC6 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
COL27A1Q8IZC6 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
COL27A1Q8IZC6 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC18.19■□□□□ 0.5
COL27A1Q8IZC6 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18.19■□□□□ 0.5
COL27A1Q8IZC6 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC18.19■□□□□ 0.5
COL27A1Q8IZC6 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC18.19■□□□□ 0.5
COL27A1Q8IZC6 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC18.19■□□□□ 0.5
COL27A1Q8IZC6 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
COL27A1Q8IZC6 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
COL27A1Q8IZC6 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
COL27A1Q8IZC6 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
COL27A1Q8IZC6 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC18.19■□□□□ 0.5
COL27A1Q8IZC6 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC18.19■□□□□ 0.5
COL27A1Q8IZC6 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC18.19■□□□□ 0.5
COL27A1Q8IZC6 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC18.19■□□□□ 0.5
COL27A1Q8IZC6 PRR29-207ENST00000580752 458 ntTSL 3 BASIC18.19■□□□□ 0.5
COL27A1Q8IZC6 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC18.19■□□□□ 0.5
COL27A1Q8IZC6 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
COL27A1Q8IZC6 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
COL27A1Q8IZC6 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
COL27A1Q8IZC6 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.19■□□□□ 0.5
COL27A1Q8IZC6 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
COL27A1Q8IZC6 GABARAPL3-202ENST00000624044 1851 ntBASIC18.19■□□□□ 0.5
COL27A1Q8IZC6 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
COL27A1Q8IZC6 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
COL27A1Q8IZC6 BUB3-202ENST00000368859 667 ntTSL 3 BASIC18.18■□□□□ 0.5
COL27A1Q8IZC6 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
COL27A1Q8IZC6 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC18.18■□□□□ 0.5
COL27A1Q8IZC6 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC18.18■□□□□ 0.5
COL27A1Q8IZC6 AC007375.3-201ENST00000600936 2314 ntBASIC18.18■□□□□ 0.5
COL27A1Q8IZC6 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC18.18■□□□□ 0.5
COL27A1Q8IZC6 AC093525.10-201ENST00000625130 1569 ntBASIC18.18■□□□□ 0.5
COL27A1Q8IZC6 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC18.18■□□□□ 0.5
COL27A1Q8IZC6 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
COL27A1Q8IZC6 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
COL27A1Q8IZC6 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
COL27A1Q8IZC6 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
COL27A1Q8IZC6 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
COL27A1Q8IZC6 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC18.18■□□□□ 0.5
COL27A1Q8IZC6 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
COL27A1Q8IZC6 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
COL27A1Q8IZC6 AC140113.3-201ENST00000605663 199 ntBASIC18.18■□□□□ 0.5
COL27A1Q8IZC6 FGF14-AS2-201ENST00000606448 1074 ntBASIC18.18■□□□□ 0.5
COL27A1Q8IZC6 IFNL4P1-201ENST00000607083 540 ntBASIC18.18■□□□□ 0.5
COL27A1Q8IZC6 IRF5-214ENST00000613821 595 ntTSL 5 BASIC18.18■□□□□ 0.5
COL27A1Q8IZC6 VPS72-207ENST00000640458 689 ntTSL 5 BASIC18.18■□□□□ 0.5
COL27A1Q8IZC6 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
COL27A1Q8IZC6 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
COL27A1Q8IZC6 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
COL27A1Q8IZC6 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
COL27A1Q8IZC6 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
COL27A1Q8IZC6 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
COL27A1Q8IZC6 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
COL27A1Q8IZC6 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC18.17■□□□□ 0.5
COL27A1Q8IZC6 AC026396.1-201ENST00000419388 421 ntBASIC18.17■□□□□ 0.5
COL27A1Q8IZC6 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
COL27A1Q8IZC6 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC18.17■□□□□ 0.5
COL27A1Q8IZC6 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC18.17■□□□□ 0.5
COL27A1Q8IZC6 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
COL27A1Q8IZC6 TCF3P1-201ENST00000423021 1937 ntBASIC18.17■□□□□ 0.5
COL27A1Q8IZC6 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC18.17■□□□□ 0.5
COL27A1Q8IZC6 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
COL27A1Q8IZC6 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
COL27A1Q8IZC6 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
COL27A1Q8IZC6 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
COL27A1Q8IZC6 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
COL27A1Q8IZC6 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
COL27A1Q8IZC6 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
COL27A1Q8IZC6 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
COL27A1Q8IZC6 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
COL27A1Q8IZC6 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
COL27A1Q8IZC6 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
COL27A1Q8IZC6 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
COL27A1Q8IZC6 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC18.16■□□□□ 0.5
COL27A1Q8IZC6 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC18.16■□□□□ 0.5
COL27A1Q8IZC6 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
COL27A1Q8IZC6 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC18.16■□□□□ 0.5
COL27A1Q8IZC6 AC099778.1-201ENST00000568593 1911 ntBASIC18.16■□□□□ 0.5
COL27A1Q8IZC6 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
COL27A1Q8IZC6 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
COL27A1Q8IZC6 GAS2L1P1-201ENST00000420145 1480 ntBASIC18.16■□□□□ 0.5
COL27A1Q8IZC6 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
COL27A1Q8IZC6 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
COL27A1Q8IZC6 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
COL27A1Q8IZC6 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
COL27A1Q8IZC6 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms