Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
NPAS3Q8IXF0 AP000523.1-201ENST00000398242 1049 ntBASIC19.96■□□□□ 0.79
NPAS3Q8IXF0 KRT18P48-201ENST00000434763 852 ntBASIC19.96■□□□□ 0.79
NPAS3Q8IXF0 SNX5-210ENST00000481323 562 ntTSL 3 BASIC19.96■□□□□ 0.79
NPAS3Q8IXF0 AL121894.2-201ENST00000602977 491 ntBASIC19.96■□□□□ 0.79
NPAS3Q8IXF0 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC19.96■□□□□ 0.79
NPAS3Q8IXF0 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NPAS3Q8IXF0 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
NPAS3Q8IXF0 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
NPAS3Q8IXF0 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NPAS3Q8IXF0 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
NPAS3Q8IXF0 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.96■□□□□ 0.79
NPAS3Q8IXF0 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.95■□□□□ 0.78
NPAS3Q8IXF0 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
NPAS3Q8IXF0 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.95■□□□□ 0.78
NPAS3Q8IXF0 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NPAS3Q8IXF0 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC19.95■□□□□ 0.78
NPAS3Q8IXF0 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.95■□□□□ 0.78
NPAS3Q8IXF0 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
NPAS3Q8IXF0 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NPAS3Q8IXF0 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
NPAS3Q8IXF0 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC19.95■□□□□ 0.78
NPAS3Q8IXF0 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC19.95■□□□□ 0.78
NPAS3Q8IXF0 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC19.95■□□□□ 0.78
NPAS3Q8IXF0 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC19.95■□□□□ 0.78
NPAS3Q8IXF0 WDR88-203ENST00000592765 651 ntTSL 5 BASIC19.95■□□□□ 0.78
NPAS3Q8IXF0 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
NPAS3Q8IXF0 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
NPAS3Q8IXF0 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
NPAS3Q8IXF0 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
NPAS3Q8IXF0 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NPAS3Q8IXF0 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
NPAS3Q8IXF0 AL512408.1-201ENST00000569378 2000 ntBASIC19.95■□□□□ 0.78
NPAS3Q8IXF0 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC19.95■□□□□ 0.78
NPAS3Q8IXF0 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
NPAS3Q8IXF0 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NPAS3Q8IXF0 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NPAS3Q8IXF0 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
NPAS3Q8IXF0 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
NPAS3Q8IXF0 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NPAS3Q8IXF0 ANKRD18DP-204ENST00000455355 1975 ntBASIC19.94■□□□□ 0.78
NPAS3Q8IXF0 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
NPAS3Q8IXF0 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
NPAS3Q8IXF0 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NPAS3Q8IXF0 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
NPAS3Q8IXF0 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC19.94■□□□□ 0.78
NPAS3Q8IXF0 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
NPAS3Q8IXF0 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NPAS3Q8IXF0 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
NPAS3Q8IXF0 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC19.94■□□□□ 0.78
NPAS3Q8IXF0 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.94■□□□□ 0.78
NPAS3Q8IXF0 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NPAS3Q8IXF0 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
NPAS3Q8IXF0 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.93■□□□□ 0.78
NPAS3Q8IXF0 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
NPAS3Q8IXF0 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
NPAS3Q8IXF0 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC19.93■□□□□ 0.78
NPAS3Q8IXF0 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC19.93■□□□□ 0.78
NPAS3Q8IXF0 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
NPAS3Q8IXF0 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NPAS3Q8IXF0 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
NPAS3Q8IXF0 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
NPAS3Q8IXF0 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NPAS3Q8IXF0 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NPAS3Q8IXF0 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC19.93■□□□□ 0.78
NPAS3Q8IXF0 PTK2-216ENST00000519881 863 ntTSL 3 BASIC19.93■□□□□ 0.78
NPAS3Q8IXF0 VENTXP5-201ENST00000523979 775 ntBASIC19.93■□□□□ 0.78
NPAS3Q8IXF0 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC19.93■□□□□ 0.78
NPAS3Q8IXF0 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC19.93■□□□□ 0.78
NPAS3Q8IXF0 NEK4P2-201ENST00000580004 1012 ntBASIC19.93■□□□□ 0.78
NPAS3Q8IXF0 DFFB-212ENST00000625756 649 ntTSL 5 BASIC19.93■□□□□ 0.78
NPAS3Q8IXF0 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NPAS3Q8IXF0 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC19.93■□□□□ 0.78
NPAS3Q8IXF0 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC19.93■□□□□ 0.78
NPAS3Q8IXF0 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
NPAS3Q8IXF0 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NPAS3Q8IXF0 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NPAS3Q8IXF0 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NPAS3Q8IXF0 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
NPAS3Q8IXF0 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
NPAS3Q8IXF0 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC19.92■□□□□ 0.78
NPAS3Q8IXF0 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NPAS3Q8IXF0 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
NPAS3Q8IXF0 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NPAS3Q8IXF0 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC19.92■□□□□ 0.78
NPAS3Q8IXF0 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19.92■□□□□ 0.78
NPAS3Q8IXF0 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC19.92■□□□□ 0.78
NPAS3Q8IXF0 DUSP5P1-201ENST00000441325 1139 ntBASIC19.92■□□□□ 0.78
NPAS3Q8IXF0 AC112907.2-201ENST00000448639 330 ntBASIC19.92■□□□□ 0.78
NPAS3Q8IXF0 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC19.92■□□□□ 0.78
NPAS3Q8IXF0 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC19.92■□□□□ 0.78
NPAS3Q8IXF0 CD81-212ENST00000526072 1172 ntTSL 5 BASIC19.92■□□□□ 0.78
NPAS3Q8IXF0 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
NPAS3Q8IXF0 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC19.92■□□□□ 0.78
NPAS3Q8IXF0 AL136038.3-201ENST00000561909 1096 ntBASIC19.92■□□□□ 0.78
NPAS3Q8IXF0 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC19.92■□□□□ 0.78
NPAS3Q8IXF0 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC19.92■□□□□ 0.78
NPAS3Q8IXF0 AC083849.1-201ENST00000615227 514 ntBASIC19.92■□□□□ 0.78
NPAS3Q8IXF0 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
NPAS3Q8IXF0 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms