Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 PFKL-212ENST00000628044 129 ntTSL 3 BASIC20.32■□□□□ 0.84
CCDC50Q8IVM0 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC20.32■□□□□ 0.84
CCDC50Q8IVM0 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC20.32■□□□□ 0.84
CCDC50Q8IVM0 AC092368.3-202ENST00000574180 1591 ntBASIC20.32■□□□□ 0.84
CCDC50Q8IVM0 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC50Q8IVM0 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
CCDC50Q8IVM0 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC50Q8IVM0 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC50Q8IVM0 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC20.32■□□□□ 0.84
CCDC50Q8IVM0 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC50Q8IVM0 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
CCDC50Q8IVM0 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC50Q8IVM0 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC50Q8IVM0 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC50Q8IVM0 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC50Q8IVM0 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
CCDC50Q8IVM0 PPP1R14BP2-201ENST00000426284 444 ntBASIC20.31■□□□□ 0.84
CCDC50Q8IVM0 NCF1B-203ENST00000435988 1254 ntBASIC20.31■□□□□ 0.84
CCDC50Q8IVM0 GUSBP6-202ENST00000438529 1198 ntBASIC20.31■□□□□ 0.84
CCDC50Q8IVM0 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC20.31■□□□□ 0.84
CCDC50Q8IVM0 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC20.31■□□□□ 0.84
CCDC50Q8IVM0 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC20.31■□□□□ 0.84
CCDC50Q8IVM0 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC20.31■□□□□ 0.84
CCDC50Q8IVM0 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC50Q8IVM0 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC50Q8IVM0 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC50Q8IVM0 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC20.31■□□□□ 0.84
CCDC50Q8IVM0 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
CCDC50Q8IVM0 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC50Q8IVM0 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC50Q8IVM0 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
CCDC50Q8IVM0 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC50Q8IVM0 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC50Q8IVM0 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC20.3■□□□□ 0.84
CCDC50Q8IVM0 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC50Q8IVM0 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC50Q8IVM0 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC50Q8IVM0 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC50Q8IVM0 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC20.3■□□□□ 0.84
CCDC50Q8IVM0 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC50Q8IVM0 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC20.3■□□□□ 0.84
CCDC50Q8IVM0 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC20.3■□□□□ 0.84
CCDC50Q8IVM0 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
CCDC50Q8IVM0 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC20.3■□□□□ 0.84
CCDC50Q8IVM0 GATS-209ENST00000454084 1030 ntTSL 3 BASIC20.3■□□□□ 0.84
CCDC50Q8IVM0 RHEB-204ENST00000472642 900 ntTSL 3 BASIC20.3■□□□□ 0.84
CCDC50Q8IVM0 AC097658.1-201ENST00000475555 843 ntBASIC20.3■□□□□ 0.84
CCDC50Q8IVM0 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC50Q8IVM0 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC20.3■□□□□ 0.84
CCDC50Q8IVM0 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC50Q8IVM0 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC20.3■□□□□ 0.84
CCDC50Q8IVM0 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC50Q8IVM0 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC50Q8IVM0 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC20.3■□□□□ 0.84
CCDC50Q8IVM0 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
CCDC50Q8IVM0 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC50Q8IVM0 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC20.29■□□□□ 0.84
CCDC50Q8IVM0 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
CCDC50Q8IVM0 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC20.29■□□□□ 0.84
CCDC50Q8IVM0 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
CCDC50Q8IVM0 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC50Q8IVM0 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC50Q8IVM0 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC50Q8IVM0 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC20.29■□□□□ 0.84
CCDC50Q8IVM0 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC50Q8IVM0 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC50Q8IVM0 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC50Q8IVM0 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC50Q8IVM0 REXO2-208ENST00000539754 791 ntTSL 2 BASIC20.29■□□□□ 0.84
CCDC50Q8IVM0 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC50Q8IVM0 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC20.29■□□□□ 0.84
CCDC50Q8IVM0 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC20.29■□□□□ 0.84
CCDC50Q8IVM0 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC50Q8IVM0 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC20.29■□□□□ 0.84
CCDC50Q8IVM0 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC20.29■□□□□ 0.84
CCDC50Q8IVM0 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC50Q8IVM0 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
CCDC50Q8IVM0 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC50Q8IVM0 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC50Q8IVM0 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC20.29■□□□□ 0.84
CCDC50Q8IVM0 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC20.29■□□□□ 0.84
CCDC50Q8IVM0 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC20.28■□□□□ 0.84
CCDC50Q8IVM0 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC50Q8IVM0 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC50Q8IVM0 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC50Q8IVM0 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC50Q8IVM0 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC50Q8IVM0 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC20.28■□□□□ 0.84
CCDC50Q8IVM0 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC50Q8IVM0 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC50Q8IVM0 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC50Q8IVM0 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC50Q8IVM0 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC50Q8IVM0 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC50Q8IVM0 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC20.28■□□□□ 0.84
CCDC50Q8IVM0 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC20.28■□□□□ 0.84
CCDC50Q8IVM0 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC50Q8IVM0 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC20.28■□□□□ 0.84
CCDC50Q8IVM0 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC50Q8IVM0 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms