Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.04■□□□□ 0.48
CCDC71Q8IV32 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
CCDC71Q8IV32 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC71Q8IV32 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC71Q8IV32 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC18.04■□□□□ 0.48
CCDC71Q8IV32 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC71Q8IV32 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
CCDC71Q8IV32 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC71Q8IV32 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC71Q8IV32 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
CCDC71Q8IV32 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
CCDC71Q8IV32 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC18.04■□□□□ 0.48
CCDC71Q8IV32 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
CCDC71Q8IV32 GXYLT1P3-201ENST00000453058 1193 ntBASIC18.04■□□□□ 0.48
CCDC71Q8IV32 LY6E-205ENST00000519611 635 ntTSL 3 BASIC18.04■□□□□ 0.48
CCDC71Q8IV32 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC18.04■□□□□ 0.48
CCDC71Q8IV32 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
CCDC71Q8IV32 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
CCDC71Q8IV32 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC18.04■□□□□ 0.48
CCDC71Q8IV32 AL356652.1-201ENST00000615962 565 ntBASIC18.04■□□□□ 0.48
CCDC71Q8IV32 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC71Q8IV32 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
CCDC71Q8IV32 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.04■□□□□ 0.48
CCDC71Q8IV32 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC71Q8IV32 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.04■□□□□ 0.48
CCDC71Q8IV32 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC71Q8IV32 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CCDC71Q8IV32 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC71Q8IV32 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC18.03■□□□□ 0.48
CCDC71Q8IV32 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
CCDC71Q8IV32 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC71Q8IV32 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
CCDC71Q8IV32 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC71Q8IV32 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC71Q8IV32 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC71Q8IV32 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC18.03■□□□□ 0.48
CCDC71Q8IV32 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC71Q8IV32 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.03■□□□□ 0.48
CCDC71Q8IV32 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC71Q8IV32 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC71Q8IV32 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.03■□□□□ 0.48
CCDC71Q8IV32 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC71Q8IV32 MDFI-202ENST00000373050 809 ntTSL 2 BASIC18.03■□□□□ 0.48
CCDC71Q8IV32 ECEL1P3-201ENST00000427961 737 ntBASIC18.03■□□□□ 0.48
CCDC71Q8IV32 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC71Q8IV32 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC18.03■□□□□ 0.48
CCDC71Q8IV32 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC71Q8IV32 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC18.03■□□□□ 0.48
CCDC71Q8IV32 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
CCDC71Q8IV32 AC120498.8-201ENST00000614275 531 ntBASIC18.03■□□□□ 0.48
CCDC71Q8IV32 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC71Q8IV32 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC71Q8IV32 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC71Q8IV32 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
CCDC71Q8IV32 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC18.03■□□□□ 0.48
CCDC71Q8IV32 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC71Q8IV32 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC18.03■□□□□ 0.48
CCDC71Q8IV32 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCDC71Q8IV32 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCDC71Q8IV32 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCDC71Q8IV32 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CCDC71Q8IV32 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC18.02■□□□□ 0.48
CCDC71Q8IV32 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCDC71Q8IV32 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC18.02■□□□□ 0.48
CCDC71Q8IV32 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCDC71Q8IV32 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CCDC71Q8IV32 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
CCDC71Q8IV32 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
CCDC71Q8IV32 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCDC71Q8IV32 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.02■□□□□ 0.48
CCDC71Q8IV32 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCDC71Q8IV32 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCDC71Q8IV32 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CCDC71Q8IV32 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCDC71Q8IV32 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
CCDC71Q8IV32 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
CCDC71Q8IV32 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCDC71Q8IV32 AC239809.2-201ENST00000415381 517 ntBASIC18.02■□□□□ 0.48
CCDC71Q8IV32 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
CCDC71Q8IV32 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CCDC71Q8IV32 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC18.02■□□□□ 0.48
CCDC71Q8IV32 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CCDC71Q8IV32 ABHD17AP6-201ENST00000458502 1044 ntBASIC18.02■□□□□ 0.48
CCDC71Q8IV32 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CCDC71Q8IV32 REXO2-216ENST00000544196 452 ntTSL 3 BASIC18.02■□□□□ 0.48
CCDC71Q8IV32 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC18.02■□□□□ 0.48
CCDC71Q8IV32 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC18.02■□□□□ 0.48
CCDC71Q8IV32 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC18.02■□□□□ 0.48
CCDC71Q8IV32 AC005829.2-201ENST00000571422 1056 ntBASIC18.02■□□□□ 0.48
CCDC71Q8IV32 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC18.02■□□□□ 0.48
CCDC71Q8IV32 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC18.02■□□□□ 0.48
CCDC71Q8IV32 AC073912.3-201ENST00000624414 853 ntBASIC18.02■□□□□ 0.48
CCDC71Q8IV32 AC104581.1-202ENST00000635932 2618 ntBASIC18.02■□□□□ 0.48
CCDC71Q8IV32 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.02■□□□□ 0.47
CCDC71Q8IV32 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CCDC71Q8IV32 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC18.02■□□□□ 0.47
CCDC71Q8IV32 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
CCDC71Q8IV32 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.47
CCDC71Q8IV32 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
CCDC71Q8IV32 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.02■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms