Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
NPAS4Q8IUM7 GABARAPL3-202ENST00000624044 1851 ntBASIC20.67■□□□□ 0.9
NPAS4Q8IUM7 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NPAS4Q8IUM7 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC20.67■□□□□ 0.9
NPAS4Q8IUM7 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC20.67■□□□□ 0.9
NPAS4Q8IUM7 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC20.67■□□□□ 0.9
NPAS4Q8IUM7 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC20.67■□□□□ 0.9
NPAS4Q8IUM7 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
NPAS4Q8IUM7 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC20.67■□□□□ 0.9
NPAS4Q8IUM7 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.67■□□□□ 0.9
NPAS4Q8IUM7 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
NPAS4Q8IUM7 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
NPAS4Q8IUM7 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NPAS4Q8IUM7 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NPAS4Q8IUM7 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
NPAS4Q8IUM7 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NPAS4Q8IUM7 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NPAS4Q8IUM7 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NPAS4Q8IUM7 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NPAS4Q8IUM7 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
NPAS4Q8IUM7 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NPAS4Q8IUM7 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NPAS4Q8IUM7 DUSP5P1-201ENST00000441325 1139 ntBASIC20.66■□□□□ 0.9
NPAS4Q8IUM7 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC20.66■□□□□ 0.9
NPAS4Q8IUM7 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC20.66■□□□□ 0.9
NPAS4Q8IUM7 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC20.66■□□□□ 0.9
NPAS4Q8IUM7 AL121894.2-201ENST00000602977 491 ntBASIC20.66■□□□□ 0.9
NPAS4Q8IUM7 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC20.66■□□□□ 0.9
NPAS4Q8IUM7 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC20.66■□□□□ 0.9
NPAS4Q8IUM7 LINC01311-201ENST00000565162 1445 ntBASIC20.66■□□□□ 0.9
NPAS4Q8IUM7 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
NPAS4Q8IUM7 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NPAS4Q8IUM7 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC20.66■□□□□ 0.9
NPAS4Q8IUM7 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
NPAS4Q8IUM7 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.66■□□□□ 0.9
NPAS4Q8IUM7 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NPAS4Q8IUM7 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NPAS4Q8IUM7 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC20.65■□□□□ 0.9
NPAS4Q8IUM7 TBC1D3P2-202ENST00000577902 1649 ntBASIC20.65■□□□□ 0.9
NPAS4Q8IUM7 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC20.65■□□□□ 0.9
NPAS4Q8IUM7 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC20.65■□□□□ 0.9
NPAS4Q8IUM7 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC20.65■□□□□ 0.9
NPAS4Q8IUM7 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
NPAS4Q8IUM7 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NPAS4Q8IUM7 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NPAS4Q8IUM7 GAD2-202ENST00000376248 680 ntTSL 5 BASIC20.65■□□□□ 0.9
NPAS4Q8IUM7 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NPAS4Q8IUM7 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NPAS4Q8IUM7 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC20.65■□□□□ 0.9
NPAS4Q8IUM7 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC20.65■□□□□ 0.9
NPAS4Q8IUM7 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC20.65■□□□□ 0.9
NPAS4Q8IUM7 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NPAS4Q8IUM7 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC20.65■□□□□ 0.9
NPAS4Q8IUM7 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NPAS4Q8IUM7 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NPAS4Q8IUM7 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
NPAS4Q8IUM7 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NPAS4Q8IUM7 AC104417.2-201ENST00000562989 1793 ntBASIC20.64■□□□□ 0.9
NPAS4Q8IUM7 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.64■□□□□ 0.9
NPAS4Q8IUM7 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC20.64■□□□□ 0.9
NPAS4Q8IUM7 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
NPAS4Q8IUM7 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NPAS4Q8IUM7 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
NPAS4Q8IUM7 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
NPAS4Q8IUM7 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NPAS4Q8IUM7 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NPAS4Q8IUM7 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NPAS4Q8IUM7 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NPAS4Q8IUM7 SPDYE15P-201ENST00000424157 909 ntBASIC20.64■□□□□ 0.89
NPAS4Q8IUM7 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC20.64■□□□□ 0.89
NPAS4Q8IUM7 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC20.64■□□□□ 0.89
NPAS4Q8IUM7 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC20.64■□□□□ 0.89
NPAS4Q8IUM7 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC20.64■□□□□ 0.89
NPAS4Q8IUM7 WDR88-203ENST00000592765 651 ntTSL 5 BASIC20.64■□□□□ 0.89
NPAS4Q8IUM7 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
NPAS4Q8IUM7 CR769767.2-201ENST00000622735 460 ntBASIC20.64■□□□□ 0.89
NPAS4Q8IUM7 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
NPAS4Q8IUM7 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
NPAS4Q8IUM7 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NPAS4Q8IUM7 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
NPAS4Q8IUM7 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC20.64■□□□□ 0.89
NPAS4Q8IUM7 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC20.64■□□□□ 0.89
NPAS4Q8IUM7 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
NPAS4Q8IUM7 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NPAS4Q8IUM7 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
NPAS4Q8IUM7 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC20.63■□□□□ 0.89
NPAS4Q8IUM7 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NPAS4Q8IUM7 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NPAS4Q8IUM7 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.63■□□□□ 0.89
NPAS4Q8IUM7 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
NPAS4Q8IUM7 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
NPAS4Q8IUM7 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC20.63■□□□□ 0.89
NPAS4Q8IUM7 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
NPAS4Q8IUM7 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NPAS4Q8IUM7 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
NPAS4Q8IUM7 ILF2-202ENST00000368681 726 ntTSL 2 BASIC20.63■□□□□ 0.89
NPAS4Q8IUM7 FXN-203ENST00000396366 922 ntTSL 2 BASIC20.63■□□□□ 0.89
NPAS4Q8IUM7 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
NPAS4Q8IUM7 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
NPAS4Q8IUM7 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms