Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
VRK2Q86Y07 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC17.81■□□□□ 0.44
VRK2Q86Y07 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
VRK2Q86Y07 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
VRK2Q86Y07 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
VRK2Q86Y07 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
VRK2Q86Y07 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
VRK2Q86Y07 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC17.81■□□□□ 0.44
VRK2Q86Y07 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
VRK2Q86Y07 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
VRK2Q86Y07 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC17.81■□□□□ 0.44
VRK2Q86Y07 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC17.81■□□□□ 0.44
VRK2Q86Y07 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
VRK2Q86Y07 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
VRK2Q86Y07 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
VRK2Q86Y07 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
VRK2Q86Y07 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
VRK2Q86Y07 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
VRK2Q86Y07 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
VRK2Q86Y07 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
VRK2Q86Y07 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
VRK2Q86Y07 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
VRK2Q86Y07 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC17.81■□□□□ 0.44
VRK2Q86Y07 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
VRK2Q86Y07 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
VRK2Q86Y07 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC17.8■□□□□ 0.44
VRK2Q86Y07 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
VRK2Q86Y07 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
VRK2Q86Y07 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
VRK2Q86Y07 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
VRK2Q86Y07 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.8■□□□□ 0.44
VRK2Q86Y07 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
VRK2Q86Y07 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC17.8■□□□□ 0.44
VRK2Q86Y07 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
VRK2Q86Y07 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
VRK2Q86Y07 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
VRK2Q86Y07 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC17.8■□□□□ 0.44
VRK2Q86Y07 F2R-202ENST00000505600 442 ntTSL 2 BASIC17.8■□□□□ 0.44
VRK2Q86Y07 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC17.8■□□□□ 0.44
VRK2Q86Y07 EMC9-206ENST00000560403 872 ntTSL 2 BASIC17.8■□□□□ 0.44
VRK2Q86Y07 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
VRK2Q86Y07 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
VRK2Q86Y07 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
VRK2Q86Y07 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
VRK2Q86Y07 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC17.8■□□□□ 0.44
VRK2Q86Y07 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
VRK2Q86Y07 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
VRK2Q86Y07 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC17.8■□□□□ 0.44
VRK2Q86Y07 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
VRK2Q86Y07 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
VRK2Q86Y07 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
VRK2Q86Y07 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC17.8■□□□□ 0.44
VRK2Q86Y07 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
VRK2Q86Y07 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
VRK2Q86Y07 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
VRK2Q86Y07 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
VRK2Q86Y07 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
VRK2Q86Y07 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
VRK2Q86Y07 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC17.79■□□□□ 0.44
VRK2Q86Y07 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
VRK2Q86Y07 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
VRK2Q86Y07 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
VRK2Q86Y07 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
VRK2Q86Y07 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
VRK2Q86Y07 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC17.79■□□□□ 0.44
VRK2Q86Y07 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
VRK2Q86Y07 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
VRK2Q86Y07 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
VRK2Q86Y07 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
VRK2Q86Y07 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC17.79■□□□□ 0.44
VRK2Q86Y07 AP003097.1-201ENST00000530657 1135 ntBASIC17.79■□□□□ 0.44
VRK2Q86Y07 PRKY-204ENST00000533551 1019 ntBASIC17.79■□□□□ 0.44
VRK2Q86Y07 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
VRK2Q86Y07 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC17.79■□□□□ 0.44
VRK2Q86Y07 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC17.79■□□□□ 0.44
VRK2Q86Y07 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
VRK2Q86Y07 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
VRK2Q86Y07 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
VRK2Q86Y07 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
VRK2Q86Y07 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
VRK2Q86Y07 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
VRK2Q86Y07 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
VRK2Q86Y07 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
VRK2Q86Y07 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC17.79■□□□□ 0.44
VRK2Q86Y07 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
VRK2Q86Y07 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
VRK2Q86Y07 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
VRK2Q86Y07 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
VRK2Q86Y07 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC17.78■□□□□ 0.44
VRK2Q86Y07 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC17.78■□□□□ 0.44
VRK2Q86Y07 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
VRK2Q86Y07 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
VRK2Q86Y07 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
VRK2Q86Y07 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC17.78■□□□□ 0.44
VRK2Q86Y07 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC17.78■□□□□ 0.44
VRK2Q86Y07 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC17.78■□□□□ 0.44
VRK2Q86Y07 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC17.78■□□□□ 0.44
VRK2Q86Y07 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC17.78■□□□□ 0.44
VRK2Q86Y07 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC17.78■□□□□ 0.44
VRK2Q86Y07 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms