Protein–RNA interactions for Protein: Q5VT99

LRRC38, Leucine-rich repeat-containing protein 38, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC38Q5VT99 HLA-A-209ENST00000638375 975 ntBASIC20.02■□□□□ 0.8
LRRC38Q5VT99 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC20.02■□□□□ 0.8
LRRC38Q5VT99 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
LRRC38Q5VT99 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LRRC38Q5VT99 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
LRRC38Q5VT99 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LRRC38Q5VT99 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC20.02■□□□□ 0.8
LRRC38Q5VT99 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
LRRC38Q5VT99 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.79
LRRC38Q5VT99 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20.02■□□□□ 0.79
LRRC38Q5VT99 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
LRRC38Q5VT99 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
LRRC38Q5VT99 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
LRRC38Q5VT99 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
LRRC38Q5VT99 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC20.02■□□□□ 0.79
LRRC38Q5VT99 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
LRRC38Q5VT99 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
LRRC38Q5VT99 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
LRRC38Q5VT99 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
LRRC38Q5VT99 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC20.01■□□□□ 0.79
LRRC38Q5VT99 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
LRRC38Q5VT99 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LRRC38Q5VT99 AC093525.10-201ENST00000625130 1569 ntBASIC20.01■□□□□ 0.79
LRRC38Q5VT99 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LRRC38Q5VT99 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LRRC38Q5VT99 TSPY21P-201ENST00000433481 731 ntBASIC20.01■□□□□ 0.79
LRRC38Q5VT99 RNA5SP413-201ENST00000516373 109 ntBASIC20.01■□□□□ 0.79
LRRC38Q5VT99 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC20.01■□□□□ 0.79
LRRC38Q5VT99 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
LRRC38Q5VT99 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
LRRC38Q5VT99 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
LRRC38Q5VT99 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC20.01■□□□□ 0.79
LRRC38Q5VT99 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
LRRC38Q5VT99 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
LRRC38Q5VT99 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
LRRC38Q5VT99 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LRRC38Q5VT99 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC20.01■□□□□ 0.79
LRRC38Q5VT99 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
LRRC38Q5VT99 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LRRC38Q5VT99 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LRRC38Q5VT99 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LRRC38Q5VT99 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC20■□□□□ 0.79
LRRC38Q5VT99 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
LRRC38Q5VT99 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LRRC38Q5VT99 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC20■□□□□ 0.79
LRRC38Q5VT99 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
LRRC38Q5VT99 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
LRRC38Q5VT99 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LRRC38Q5VT99 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LRRC38Q5VT99 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LRRC38Q5VT99 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC20■□□□□ 0.79
LRRC38Q5VT99 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC20■□□□□ 0.79
LRRC38Q5VT99 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC20■□□□□ 0.79
LRRC38Q5VT99 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
LRRC38Q5VT99 AL160286.2-201ENST00000567150 934 ntBASIC20■□□□□ 0.79
LRRC38Q5VT99 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC20■□□□□ 0.79
LRRC38Q5VT99 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC20■□□□□ 0.79
LRRC38Q5VT99 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LRRC38Q5VT99 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC20■□□□□ 0.79
LRRC38Q5VT99 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
LRRC38Q5VT99 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC20■□□□□ 0.79
LRRC38Q5VT99 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
LRRC38Q5VT99 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC20■□□□□ 0.79
LRRC38Q5VT99 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC20■□□□□ 0.79
LRRC38Q5VT99 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LRRC38Q5VT99 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC20■□□□□ 0.79
LRRC38Q5VT99 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LRRC38Q5VT99 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LRRC38Q5VT99 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
LRRC38Q5VT99 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
LRRC38Q5VT99 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC19.99■□□□□ 0.79
LRRC38Q5VT99 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
LRRC38Q5VT99 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
LRRC38Q5VT99 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC19.99■□□□□ 0.79
LRRC38Q5VT99 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LRRC38Q5VT99 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.99■□□□□ 0.79
LRRC38Q5VT99 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LRRC38Q5VT99 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
LRRC38Q5VT99 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC19.99■□□□□ 0.79
LRRC38Q5VT99 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
LRRC38Q5VT99 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC19.99■□□□□ 0.79
LRRC38Q5VT99 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC19.99■□□□□ 0.79
LRRC38Q5VT99 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC19.99■□□□□ 0.79
LRRC38Q5VT99 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC19.99■□□□□ 0.79
LRRC38Q5VT99 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
LRRC38Q5VT99 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
LRRC38Q5VT99 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LRRC38Q5VT99 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC19.99■□□□□ 0.79
LRRC38Q5VT99 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
LRRC38Q5VT99 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC19.98■□□□□ 0.79
LRRC38Q5VT99 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
LRRC38Q5VT99 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
LRRC38Q5VT99 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
LRRC38Q5VT99 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
LRRC38Q5VT99 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC19.98■□□□□ 0.79
LRRC38Q5VT99 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
LRRC38Q5VT99 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC19.98■□□□□ 0.79
LRRC38Q5VT99 MMAB-206ENST00000540016 945 ntTSL 3 BASIC19.98■□□□□ 0.79
LRRC38Q5VT99 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
LRRC38Q5VT99 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms