Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRRK2Q5S007 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRRK2Q5S007 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRRK2Q5S007 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRRK2Q5S007 MOK-208ENST00000519058 917 ntTSL 2 BASIC16.75■□□□□ 0.27
LRRK2Q5S007 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC16.75■□□□□ 0.27
LRRK2Q5S007 AC139887.3-201ENST00000568585 713 ntBASIC16.75■□□□□ 0.27
LRRK2Q5S007 RPS15-207ENST00000591032 550 ntTSL 3 BASIC16.75■□□□□ 0.27
LRRK2Q5S007 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRRK2Q5S007 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRRK2Q5S007 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
LRRK2Q5S007 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRRK2Q5S007 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
LRRK2Q5S007 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRRK2Q5S007 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRRK2Q5S007 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRRK2Q5S007 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
LRRK2Q5S007 AL160286.2-201ENST00000567150 934 ntBASIC16.74■□□□□ 0.27
LRRK2Q5S007 LITAF-211ENST00000572255 516 ntTSL 4 BASIC16.74■□□□□ 0.27
LRRK2Q5S007 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
LRRK2Q5S007 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
LRRK2Q5S007 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
LRRK2Q5S007 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC16.74■□□□□ 0.27
LRRK2Q5S007 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRRK2Q5S007 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
LRRK2Q5S007 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRRK2Q5S007 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRRK2Q5S007 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
LRRK2Q5S007 ME2-208ENST00000638937 2471 ntTSL 5 BASIC16.74■□□□□ 0.27
LRRK2Q5S007 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRRK2Q5S007 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRRK2Q5S007 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC16.74■□□□□ 0.27
LRRK2Q5S007 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC16.74■□□□□ 0.27
LRRK2Q5S007 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
LRRK2Q5S007 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC16.74■□□□□ 0.27
LRRK2Q5S007 PARN-205ENST00000539279 1557 ntTSL 2 BASIC16.74■□□□□ 0.27
LRRK2Q5S007 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRRK2Q5S007 RPL18-209ENST00000550645 463 ntTSL 5 BASIC16.74■□□□□ 0.27
LRRK2Q5S007 RPL18-214ENST00000552588 559 ntTSL 3 BASIC16.74■□□□□ 0.27
LRRK2Q5S007 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRRK2Q5S007 AC010327.4-202ENST00000591484 748 ntBASIC16.74■□□□□ 0.27
LRRK2Q5S007 ABBA01031661.1-201ENST00000634362 1253 ntBASIC16.74■□□□□ 0.27
LRRK2Q5S007 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
LRRK2Q5S007 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
LRRK2Q5S007 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LRRK2Q5S007 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
LRRK2Q5S007 DFFB-203ENST00000341385 572 ntTSL 5 BASIC16.73■□□□□ 0.27
LRRK2Q5S007 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
LRRK2Q5S007 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
LRRK2Q5S007 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
LRRK2Q5S007 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC16.73■□□□□ 0.27
LRRK2Q5S007 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
LRRK2Q5S007 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC16.73■□□□□ 0.27
LRRK2Q5S007 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC16.73■□□□□ 0.27
LRRK2Q5S007 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC16.73■□□□□ 0.27
LRRK2Q5S007 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC16.73■□□□□ 0.27
LRRK2Q5S007 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC16.73■□□□□ 0.27
LRRK2Q5S007 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LRRK2Q5S007 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LRRK2Q5S007 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
LRRK2Q5S007 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRRK2Q5S007 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
LRRK2Q5S007 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRRK2Q5S007 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRRK2Q5S007 GAD2-202ENST00000376248 680 ntTSL 5 BASIC16.72■□□□□ 0.27
LRRK2Q5S007 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRRK2Q5S007 FICD-205ENST00000552758 603 ntTSL 2 BASIC16.72■□□□□ 0.27
LRRK2Q5S007 AC148477.8-201ENST00000624298 468 ntBASIC16.72■□□□□ 0.27
LRRK2Q5S007 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRRK2Q5S007 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC16.72■□□□□ 0.27
LRRK2Q5S007 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRRK2Q5S007 KRT8P11-201ENST00000409686 1436 ntBASIC16.72■□□□□ 0.27
LRRK2Q5S007 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRRK2Q5S007 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRRK2Q5S007 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC16.72■□□□□ 0.27
LRRK2Q5S007 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LRRK2Q5S007 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC16.72■□□□□ 0.27
LRRK2Q5S007 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC16.72■□□□□ 0.27
LRRK2Q5S007 NMU-202ENST00000505262 693 ntTSL 3 BASIC16.72■□□□□ 0.27
LRRK2Q5S007 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LRRK2Q5S007 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC16.72■□□□□ 0.27
LRRK2Q5S007 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
LRRK2Q5S007 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRRK2Q5S007 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
LRRK2Q5S007 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC16.71■□□□□ 0.27
LRRK2Q5S007 AL024507.2-201ENST00000606070 2574 ntBASIC16.71■□□□□ 0.27
LRRK2Q5S007 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRRK2Q5S007 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRRK2Q5S007 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC16.71■□□□□ 0.27
LRRK2Q5S007 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRRK2Q5S007 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
LRRK2Q5S007 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC16.71■□□□□ 0.27
LRRK2Q5S007 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC16.71■□□□□ 0.27
LRRK2Q5S007 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.27
LRRK2Q5S007 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
LRRK2Q5S007 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC16.71■□□□□ 0.27
LRRK2Q5S007 TMEM179-206ENST00000616017 1645 ntBASIC16.71■□□□□ 0.27
LRRK2Q5S007 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC16.71■□□□□ 0.27
LRRK2Q5S007 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
LRRK2Q5S007 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms