Protein–RNA interactions for Protein: Q2M2E3

ODF4, Outer dense fiber protein 4, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ODF4Q2M2E3 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ODF4Q2M2E3 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ODF4Q2M2E3 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ODF4Q2M2E3 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ODF4Q2M2E3 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
ODF4Q2M2E3 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.04■□□□□ 0.32
ODF4Q2M2E3 PKD1P1-201ENST00000458669 6805 ntBASIC17.04■□□□□ 0.32
ODF4Q2M2E3 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ODF4Q2M2E3 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC17.04■□□□□ 0.32
ODF4Q2M2E3 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC17.04■□□□□ 0.32
ODF4Q2M2E3 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ODF4Q2M2E3 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
ODF4Q2M2E3 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC17.04■□□□□ 0.32
ODF4Q2M2E3 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ODF4Q2M2E3 SERPINH1P1-201ENST00000419794 1249 ntBASIC17.04■□□□□ 0.32
ODF4Q2M2E3 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC17.04■□□□□ 0.32
ODF4Q2M2E3 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC17.04■□□□□ 0.32
ODF4Q2M2E3 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
ODF4Q2M2E3 AC080038.1-201ENST00000611274 1154 ntBASIC17.04■□□□□ 0.32
ODF4Q2M2E3 IKBKGP1-201ENST00000612193 1073 ntBASIC17.04■□□□□ 0.32
ODF4Q2M2E3 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
ODF4Q2M2E3 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
ODF4Q2M2E3 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ODF4Q2M2E3 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
ODF4Q2M2E3 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ODF4Q2M2E3 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
ODF4Q2M2E3 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC17.04■□□□□ 0.32
ODF4Q2M2E3 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ODF4Q2M2E3 TEX21P-204ENST00000641479 1693 ntBASIC17.04■□□□□ 0.32
ODF4Q2M2E3 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
ODF4Q2M2E3 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ODF4Q2M2E3 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
ODF4Q2M2E3 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ODF4Q2M2E3 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
ODF4Q2M2E3 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
ODF4Q2M2E3 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC17.03■□□□□ 0.32
ODF4Q2M2E3 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
ODF4Q2M2E3 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
ODF4Q2M2E3 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
ODF4Q2M2E3 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC17.03■□□□□ 0.32
ODF4Q2M2E3 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
ODF4Q2M2E3 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ODF4Q2M2E3 MFF-205ENST00000354503 1085 ntTSL 2 BASIC17.03■□□□□ 0.32
ODF4Q2M2E3 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
ODF4Q2M2E3 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC17.03■□□□□ 0.32
ODF4Q2M2E3 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC17.03■□□□□ 0.32
ODF4Q2M2E3 OR2A1-AS1-201ENST00000462305 773 ntBASIC17.03■□□□□ 0.32
ODF4Q2M2E3 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC17.03■□□□□ 0.32
ODF4Q2M2E3 AF201337.1-201ENST00000520239 748 ntBASIC17.03■□□□□ 0.32
ODF4Q2M2E3 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC17.03■□□□□ 0.32
ODF4Q2M2E3 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC17.03■□□□□ 0.32
ODF4Q2M2E3 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ODF4Q2M2E3 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC17.03■□□□□ 0.32
ODF4Q2M2E3 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC17.03■□□□□ 0.32
ODF4Q2M2E3 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC17.03■□□□□ 0.32
ODF4Q2M2E3 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ODF4Q2M2E3 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ODF4Q2M2E3 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ODF4Q2M2E3 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
ODF4Q2M2E3 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ODF4Q2M2E3 AC124283.5-201ENST00000624661 1809 ntBASIC17.03■□□□□ 0.32
ODF4Q2M2E3 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
ODF4Q2M2E3 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ODF4Q2M2E3 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ODF4Q2M2E3 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
ODF4Q2M2E3 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ODF4Q2M2E3 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC17.02■□□□□ 0.32
ODF4Q2M2E3 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC17.02■□□□□ 0.32
ODF4Q2M2E3 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ODF4Q2M2E3 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
ODF4Q2M2E3 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.02■□□□□ 0.32
ODF4Q2M2E3 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ODF4Q2M2E3 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC17.02■□□□□ 0.32
ODF4Q2M2E3 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
ODF4Q2M2E3 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ODF4Q2M2E3 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ODF4Q2M2E3 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC17.02■□□□□ 0.32
ODF4Q2M2E3 AL390719.1-204ENST00000412397 1219 ntBASIC17.02■□□□□ 0.32
ODF4Q2M2E3 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC17.02■□□□□ 0.32
ODF4Q2M2E3 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC17.02■□□□□ 0.32
ODF4Q2M2E3 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC17.02■□□□□ 0.32
ODF4Q2M2E3 AC133552.2-202ENST00000575694 574 ntBASIC17.02■□□□□ 0.32
ODF4Q2M2E3 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC17.02■□□□□ 0.32
ODF4Q2M2E3 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
ODF4Q2M2E3 AC073111.5-205ENST00000641717 521 ntBASIC17.02■□□□□ 0.32
ODF4Q2M2E3 AC104581.1-202ENST00000635932 2618 ntBASIC17.02■□□□□ 0.32
ODF4Q2M2E3 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
ODF4Q2M2E3 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC17.02■□□□□ 0.31
ODF4Q2M2E3 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
ODF4Q2M2E3 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC17.02■□□□□ 0.31
ODF4Q2M2E3 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC17.02■□□□□ 0.31
ODF4Q2M2E3 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
ODF4Q2M2E3 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC17.02■□□□□ 0.31
ODF4Q2M2E3 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC17.02■□□□□ 0.31
ODF4Q2M2E3 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.31
ODF4Q2M2E3 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC17.02■□□□□ 0.31
ODF4Q2M2E3 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC17.02■□□□□ 0.31
ODF4Q2M2E3 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
ODF4Q2M2E3 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.01■□□□□ 0.31
ODF4Q2M2E3 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms