Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 AC141257.4-201ENST00000634557 245 ntBASIC23.14■■□□□ 1.3
PDS5AQ29RF7 AC136944.6-201ENST00000634818 245 ntBASIC23.14■■□□□ 1.3
PDS5AQ29RF7 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC23.14■■□□□ 1.3
PDS5AQ29RF7 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC23.14■■□□□ 1.3
PDS5AQ29RF7 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
PDS5AQ29RF7 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
PDS5AQ29RF7 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
PDS5AQ29RF7 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
PDS5AQ29RF7 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
PDS5AQ29RF7 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
PDS5AQ29RF7 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.29
PDS5AQ29RF7 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
PDS5AQ29RF7 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
PDS5AQ29RF7 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
PDS5AQ29RF7 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC23.13■■□□□ 1.29
PDS5AQ29RF7 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
PDS5AQ29RF7 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
PDS5AQ29RF7 PHB2-202ENST00000440277 996 ntTSL 5 BASIC23.13■■□□□ 1.29
PDS5AQ29RF7 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
PDS5AQ29RF7 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
PDS5AQ29RF7 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC23.13■■□□□ 1.29
PDS5AQ29RF7 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
PDS5AQ29RF7 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC23.13■■□□□ 1.29
PDS5AQ29RF7 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
PDS5AQ29RF7 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC23.13■■□□□ 1.29
PDS5AQ29RF7 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC23.13■■□□□ 1.29
PDS5AQ29RF7 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
PDS5AQ29RF7 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
PDS5AQ29RF7 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
PDS5AQ29RF7 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
PDS5AQ29RF7 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
PDS5AQ29RF7 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
PDS5AQ29RF7 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
PDS5AQ29RF7 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
PDS5AQ29RF7 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
PDS5AQ29RF7 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
PDS5AQ29RF7 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
PDS5AQ29RF7 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
PDS5AQ29RF7 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC23.12■■□□□ 1.29
PDS5AQ29RF7 AC063952.2-201ENST00000498792 1227 ntBASIC23.12■■□□□ 1.29
PDS5AQ29RF7 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC23.12■■□□□ 1.29
PDS5AQ29RF7 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC23.12■■□□□ 1.29
PDS5AQ29RF7 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
PDS5AQ29RF7 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC23.12■■□□□ 1.29
PDS5AQ29RF7 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PDS5AQ29RF7 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
PDS5AQ29RF7 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC23.12■■□□□ 1.29
PDS5AQ29RF7 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC23.12■■□□□ 1.29
PDS5AQ29RF7 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC23.12■■□□□ 1.29
PDS5AQ29RF7 AC125437.2-201ENST00000625180 2167 ntBASIC23.12■■□□□ 1.29
PDS5AQ29RF7 GAS2L1P1-201ENST00000420145 1480 ntBASIC23.12■■□□□ 1.29
PDS5AQ29RF7 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC23.11■■□□□ 1.29
PDS5AQ29RF7 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
PDS5AQ29RF7 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
PDS5AQ29RF7 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC23.11■■□□□ 1.29
PDS5AQ29RF7 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC23.11■■□□□ 1.29
PDS5AQ29RF7 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
PDS5AQ29RF7 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC23.11■■□□□ 1.29
PDS5AQ29RF7 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC23.11■■□□□ 1.29
PDS5AQ29RF7 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC23.11■■□□□ 1.29
PDS5AQ29RF7 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC23.11■■□□□ 1.29
PDS5AQ29RF7 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
PDS5AQ29RF7 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
PDS5AQ29RF7 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC23.11■■□□□ 1.29
PDS5AQ29RF7 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
PDS5AQ29RF7 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
PDS5AQ29RF7 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
PDS5AQ29RF7 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC23.11■■□□□ 1.29
PDS5AQ29RF7 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC23.11■■□□□ 1.29
PDS5AQ29RF7 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC23.11■■□□□ 1.29
PDS5AQ29RF7 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
PDS5AQ29RF7 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
PDS5AQ29RF7 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
PDS5AQ29RF7 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
PDS5AQ29RF7 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PDS5AQ29RF7 FAM8A6P-201ENST00000407496 1135 ntBASIC23.1■■□□□ 1.29
PDS5AQ29RF7 AK4P3-201ENST00000418260 669 ntBASIC23.1■■□□□ 1.29
PDS5AQ29RF7 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
PDS5AQ29RF7 COX11P1-201ENST00000489116 835 ntBASIC23.1■■□□□ 1.29
PDS5AQ29RF7 AC022616.7-201ENST00000525383 220 ntBASIC23.1■■□□□ 1.29
PDS5AQ29RF7 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC23.1■■□□□ 1.29
PDS5AQ29RF7 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
PDS5AQ29RF7 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
PDS5AQ29RF7 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC23.1■■□□□ 1.29
PDS5AQ29RF7 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
PDS5AQ29RF7 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC23.1■■□□□ 1.29
PDS5AQ29RF7 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
PDS5AQ29RF7 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC23.1■■□□□ 1.29
PDS5AQ29RF7 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
PDS5AQ29RF7 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
PDS5AQ29RF7 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC23.1■■□□□ 1.29
PDS5AQ29RF7 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
PDS5AQ29RF7 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC23.09■■□□□ 1.29
PDS5AQ29RF7 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
PDS5AQ29RF7 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PDS5AQ29RF7 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PDS5AQ29RF7 YBX1P2-201ENST00000489612 999 ntBASIC23.09■■□□□ 1.29
PDS5AQ29RF7 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
PDS5AQ29RF7 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC23.09■■□□□ 1.29
PDS5AQ29RF7 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC23.09■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms